Evidence map›Paper›PMID 25994088›Full record

ArticleScientific reports2015

Oligonucleotide Probes for ND-FISH Analysis to Identify Rye and Wheat Chromosomes.

Shulan Fu, Lei Chen, Yangyang Wang, Meng Li, Zujun Yang, Ling Qiu, Benju Yan, Zhenglong Ren, Zongxiang Tang

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed.

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  7. Impact of Alien Chromosome Introgression fromPlants (Basel, Switzerland) · 2025
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  12. Integrated review ofMolecular breeding : new strategies in plant improvement · 2025
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  13. Establishment of a genome map-based karyotype ofFrontiers in plant science · 2025
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  17. Characterization of New Wheat-Plants (Basel, Switzerland) · 2024
    Article
  18. Article
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41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shulan Fu1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Lei Chen1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Yangyang Wang1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Meng Li1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Zujun YangSchool of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, Sichuan, People's Republic of China.
Ling Qiu1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Benju YanProvince Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Zhenglong Ren1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.
Zongxiang Tang1] Province Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China [2] Agronomy College, Sichuan Agricultural University, Wenjiang, Chengdu 611130, Sichuan, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic in situ hybridization (GISH) has been widely used to detect rye (Secale cereale L.) chromosomes in wheat (Triticum aestivum L.) introgression lines. The routine procedure of GISH using genomic DNA of rye as a probe is time-consuming and labor-intensive because of the preparation and labeling of genomic DNA of rye and denaturing of chromosomes and probes. In this study, new oligonucleotide probes Oligo-1162, Oligo-pSc200 and Oligo-pSc250 were developed. The three new probes can be used for non-denaturing fluorescence in situ hybridization (ND-FISH) assays and replace genomic DNA of rye as a probe to discriminate rye chromosomes in wheat backgrounds. In addition, previously developed oligonucleotide probes Oligo-pSc119.2-1, Oligo-pSc119.2-2, Oligo-pTa535-1, Oligo-pTa535-2, Oligo-pTa71-2, Oligo-pAWRC.1 and Oligo-CCS1 can also be used for ND-FISH of wheat and rye. These probes have provided an easier, faster and more cost-effective method for the FISH analysis of wheat and hybrids derived from wheat × rye.

Indexed as

Chromosomes, PlantIn Situ Hybridization, FluorescenceMicroscopy, FluorescenceOligonucleotide ProbesPolyploidySecaleTriticumOligonucleotide Probes

Identifiers

PMID25994088
PMCPMC4440213

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