Evidence map›Paper›PMID 25993318›Full record

ArticleKidney international2015

Alternatively spliced isoforms of WT1 control podocyte-specific gene expression.

Jonathan Lefebvre, Michael Clarkson, Filippo Massa, Stephen T Bradford, Aurelie Charlet, Fabian Buske, Sandra Lacas-Gervais, Herbert Schulz, Charlotte Gimpel, Yutaka Hata and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Kidney international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. New Discoveries in Podocyte Mechanosensing and Mechanotransduction.Journal of the American Society of Nephrology : JASN · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Mechanisms of podocyte injury in genetic kidney disease.Pediatric nephrology (Berlin, Germany) · 2025
    Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. The Protective Effect of Shen Qi Wan on Adenine-Induced Podocyte Injury.Evidence-based complementary and alternative medicine : eCAM · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 9 institutions in 4 countries.

Jonathan Lefebvre1] Institute of Biology Valrose, Université de Nice-Sophia, Nice, France [2] Inserm, UMR1091, Nice, France [3] CNRS, UMR7277, Nice, France.
Michael Clarkson1] Institute of Biology Valrose, Université de Nice-Sophia, Nice, France [2] Inserm, UMR1091, Nice, France [3] CNRS, UMR7277, Nice, France.
Filippo Massa1] Institute of Biology Valrose, Université de Nice-Sophia, Nice, France [2] Inserm, UMR1091, Nice, France [3] CNRS, UMR7277, Nice, France.
Stephen T Bradford1] Institute of Biology Valrose, Université de Nice-Sophia, Nice, France [2] Inserm, UMR1091, Nice, France [3] CNRS, UMR7277, Nice, France [4] CSIRO Food and Nutrition Flagship, North Ryde, New South Wales, Australia [5] Epigenetics Group, Cancer Program, Garvan Institute of Medical Research, Darlinghurst, New South Wales, Australia.
Aurelie Charlet1] Institute of Biology Valrose, Université de Nice-Sophia, Nice, France [2] Inserm, UMR1091, Nice, France [3] CNRS, UMR7277, Nice, France.
Fabian Buske1] CSIRO Food and Nutrition Flagship, North Ryde, New South Wales, Australia [2] Epigenetics Group, Cancer Program, Garvan Institute of Medical Research, Darlinghurst, New South Wales, Australia.
Sandra Lacas-GervaisCCMA University of Nice, Nice, France.
Herbert SchulzMDC for Molecular Medicine, Berlin, Germany.
Charlotte GimpelUniversity Children's Hospital, Freiburg, Germany.
Yutaka HataTokyo Medical and Dental University, Tokyo, Japan.
Franz SchaeferUniversity Children's Hospital, Heidelberg, Germany.
Andreas Schedl1] Institute of Biology Valrose, Université de Nice-Sophia, Nice, France [2] Inserm, UMR1091, Nice, France [3] CNRS, UMR7277, Nice, France.
Centre National de la Recherche Scientifique · FRCommonwealth Scientific and Industrial Research Organisation · AUHeidelberg University · DEInserm · FRInstitut de Biologie Valrose · FRMax Delbrück Center · DETokyo Medical and Dental University · JPUniversité Côte d'Azur · FRUniversity Medical Center Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Wilms' tumor suppressor WT1 is a key regulator of podocyte function that is mutated in Denys-Drash and Frasier syndromes. Here we have used an integrative approach employing ChIP, exon array, and genetic analyses in mice to address general and isoform-specific functions of WT1 in podocyte differentiation. Analysis of ChIP-Seq data showed that almost half of the podocyte-specific genes are direct targets of WT1. Bioinformatic analysis further identified coactivator FOXC1-binding sites in proximity to WT1-bound regions, thus supporting coordinated action of these transcription factors in regulating podocyte-specific genes. Transcriptional profiling of mice lacking the WT1 alternative splice isoform (+KTS) had a more restrictive set of genes whose expression depends on these alternatively spliced isoforms. One of these genes encodes the membrane-associated guanylate kinase MAGI2, a protein that localizes to the base of the slit diaphragm. Using functional analysis in mice, we further show that MAGI2α is essential for proper localization of nephrin and the assembly of the slit diaphragm complex. Finally, a dramatic reduction of MAGI2 was found in an LPS mouse model of glomerular injury and in genetic cases of human disease. Thus, our study highlights the central role of WT1 in podocyte differentiation, identifies that WT1 has a central role in podocyte differentiation, and identifies MAGI2α as the crucial isoform in slit diaphragm assembly, suggesting a causative role of this gene in the etiology of glomerular disorders.

Indexed as

Transcription, GeneticAdaptor Proteins, Signal TransducingAlternative SplicingAnimalsBinding SitesCell DifferentiationDown-RegulationExonsFemaleForkhead Transcription FactorsGlomerulonephritis, MembranoproliferativeGlomerulosclerosis, Focal SegmentalGuanylate KinasesHumansLipopolysaccharidesMembrane ProteinsAdaptor Proteins, Signal TransducingForkhead Transcription FactorsFoxc1 protein, mouseGuanylate KinasesLipopolysaccharidesMagi2 protein, mouseMembrane ProteinsnephrinProtein IsoformsRepressor ProteinsWT1 protein, mouseWT1 Proteins

Identifiers

PMID25993318
OpenAlexW1560710707

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.