Evidence map›Paper›PMID 25992960›Full record

ArticlePloS one2015

Reticulocalbin-1 facilitates microglial phagocytosis.

Ying Ding, Nora B Caberoy, Feiye Guo, Michelle E LeBlanc, Chenming Zhang, Weiwen Wang, Feng Wang, Rui Chen, Wei Li

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Comparative Ligandomic Analysis of Human Lung Epithelial Cells Exposed to PMBiomedical and environmental sciences : BES · 2020
    Article
  7. Review
  8. Secretogranin III: a diabetic retinopathy-selective angiogenic factor.Cellular and molecular life sciences : CMLS · 2018
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Ying DingBascom Palmer Eye Institute, Dept. of Ophthalmology, University of Miami School of Medicine, Miami, FL, 33136, United States of America.
Nora B CaberoySchool of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV, 89154, United States of America.
Feiye GuoBascom Palmer Eye Institute, Dept. of Ophthalmology, University of Miami School of Medicine, Miami, FL, 33136, United States of America.
Michelle E LeBlancBascom Palmer Eye Institute, Dept. of Ophthalmology, University of Miami School of Medicine, Miami, FL, 33136, United States of America.
Chenming ZhangBascom Palmer Eye Institute, Dept. of Ophthalmology, University of Miami School of Medicine, Miami, FL, 33136, United States of America; Jinan 2nd People's Hospital, Jinan, 250001, China.
Weiwen WangBascom Palmer Eye Institute, Dept. of Ophthalmology, University of Miami School of Medicine, Miami, FL, 33136, United States of America.
Feng WangDept. of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, 77030, United States of America.
Rui ChenDept. of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, 77030, United States of America.
Wei LiBascom Palmer Eye Institute, Dept. of Ophthalmology, University of Miami School of Medicine, Miami, FL, 33136, United States of America; Neuroscience Program, University of Miami School of Medicine, Miami, FL, 33136, United States of America.
University of Miami · USBaylor College of Medicine · USUniversity of Nevada, Las Vegas · US

Funding

Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Dmitry V Ivanov · 2004 to 2026
$12.2M
Elucidation of Tubby and Tulp 1 Mechanisms by Comparitive Functional ProteomicsR01GM094449 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LI, WEI · 2011 to 2014
$1.1M
Unraveling the Mystery of Molecular Phagocyte Biology for MicrogliaR21HD075372 · NICHD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LI, WEI · 2012 to 2013
$411k
Molecular Mechanisms of Tubby and Tulp1 Mediated RPE PhagocytosisK99EY020865 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI CABEROY, NORA BLANCA · 2011 to 2011
$90k
NEI NIH HHS K99 EY020865NEI NIH HHS P30 EY014801NICHD NIH HHS R21 HD075372NICHD NIH HHS R21HD075372NIGMS NIH HHS R01 GM094449NIGMS NIH HHS R01GM094449
6 · The paper itself

Abstract

Phagocytosis is critical to the clearance of apoptotic cells, cellular debris and deleterious metabolic products for tissue homeostasis. Phagocytosis ligands directly recognizing deleterious cargos are the key to defining the functional roles of phagocytes, but are traditionally identified on a case-by-case basis with technical challenges. As a result, extrinsic regulation of phagocytosis is poorly defined. Here we demonstrate that microglial phagocytosis ligands can be systematically identified by a new approach of functional screening. One of the identified ligands is reticulocalbin-1 (Rcn1), which was originally reported as a Ca2+-binding protein with a strict expression in the endoplasmic reticulum. Our results showed that Rcn1 can be secreted from healthy cells and that secreted Rcn1 selectively bound to the surface of apoptotic neurons, but not healthy neurons. Independent characterization revealed that Rcn1 stimulated microglial phagocytosis of apoptotic but not healthy neurons. Ingested apoptotic cells were targeted to phagosomes and co-localized with phagosome marker Rab7. These data suggest that Rcn1 is a genuine phagocytosis ligand. The new approach described in this study will enable systematic identification of microglial phagocytosis ligands with broad applicability to many other phagocytes.

Indexed as

PhagocytosisAnimalsApoptosisCalcium-Binding ProteinsExtracellular SpaceHumansLigandsMacrophagesMicrogliaNeuronsPhagosomesProtein BindingProtein TransportCalcium-Binding ProteinsLigandsreticulocalbin

Identifiers

PMID25992960
PMCPMC4436338
OpenAlexW1569942706

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.