Evidence map›Paper›PMID 25988751›Full record

ArticleNature communications2015

Large-scale recent expansion of European patrilineages shown by population resequencing.

Chiara Batini, Pille Hallast, Daniel Zadik, Pierpaolo Maisano Delser, Andrea Benazzo, Silvia Ghirotto, Eduardo Arroyo-Pardo, Gianpiero L Cavalleri, Peter de Knijff, Berit Myhre Dupuy and 12 more

Open access · goldAbstract readHistorical Article
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 99 citations in OpenAlex.

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  15. Ancient DNA at the edge of the world: Continental immigration and the persistence of Neolithic male lineages in Bronze Age Orkney.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Phylogeographic review of Y chromosome haplogroups in Europe.International journal of legal medicine · 2021
    Review
  18. Article
  19. Article
  20. Human Y Chromosome Exerts Pleiotropic Effects on Susceptibility to Atherosclerosis.Arteriosclerosis, thrombosis, and vascular biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 14 institutions in 10 countries.

Chiara BatiniDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Pille HallastDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Daniel ZadikDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Pierpaolo Maisano DelserDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Andrea BenazzoDepartment of Life Sciences and Biotechnology, University of Ferrara, Via Borsari 46, 44121 Ferrara, Italy.
Silvia GhirottoDepartment of Life Sciences and Biotechnology, University of Ferrara, Via Borsari 46, 44121 Ferrara, Italy.
Eduardo Arroyo-PardoLaboratory of Forensic and Population Genetics, Department of Toxicology and Health Legislation, Faculty of Medicine, Complutense University, E-28040 Madrid, Spain.
Gianpiero L CavalleriMolecular and Cellular Therapeutics, The Royal College of Surgeons in Ireland, 123 St Stephen's Green, Dublin 2, Ireland.
Peter de KnijffDepartment of Human Genetics, Leiden University Medical Centre, 2300 RC Leiden, The Netherlands.
Berit Myhre DupuyNorwegian Institute of Public Health, Division of Forensic Sciences, N-0027 Oslo, Norway.
Heidi A EriksenCentre of Arctic Medicine, Thule Institute, University of Oulu, PO Box 7300, 90014 Oulu, Finland.
Turi E KingDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
Adolfo López de MunainDepartment of Neurosciences, University of the Basque Country, San Sebastián 20014, Spain.
Ana M López-ParraLaboratory of Forensic and Population Genetics, Department of Toxicology and Health Legislation, Faculty of Medicine, Complutense University, E-28040 Madrid, Spain.
Aphrodite LoutradisCommittee for Thalassemia of the Central Council of Health, Ministry of Health, 8 Merlin, Athens 106 71, Greece.
Jelena MilasinInstitute of Human Genetics, School of Dental Medicine, University of Belgrade, 11000 Belgrade, Serbia.
Andrea NovellettoDepartment of Biology, Tor Vergata University, Via della Ricerca Scientifica, 00133 Rome, Italy.
Horolma PamjavNetwork of Forensic Science Institutes, Institute of Forensic Medicine, , PO Box 31, 1363 Budapest, Hungary.
Antti SajantilaDepartment of Forensic Medicine, Hjelt Institute, University of Helsinki, PO Box 40, Helsinki FI-00014, Finland.
Aslıhan TolunDepartment of Molecular Biology and Genetics, Boğaziçi University, Bebek, 34342 Istanbul, Turkey.
Bruce WinneyDepartment of Oncology, University of Oxford, Roosevelt Drive Oxford, Oxford OX3 7DQ, UK.
Mark A JoblingDepartment of Genetics, University of Leicester, University Road, Leicester LE1 7RH, UK.
University of Leicester · GBUniversidad Complutense de Madrid · ESUniversity of Ferrara · ITBoğaziçi University · TRLeiden University · NLMinistry of Health · GRNorwegian Institute of Public Health · NORoyal College of Surgeons in Ireland · IEUniversity of Belgrade · RSUniversity of Helsinki · FIUniversity of Oulu · FIUniversity of Oxford · GBUniversity of Rome Tor Vergata · ITUniversity of the Basque Country · ES

Funding

European Research Council 295733Wellcome Trust 087576
6 · The paper itself

Abstract

The proportion of Europeans descending from Neolithic farmers ∼ 10 thousand years ago (KYA) or Palaeolithic hunter-gatherers has been much debated. The male-specific region of the Y chromosome (MSY) has been widely applied to this question, but unbiased estimates of diversity and time depth have been lacking. Here we show that European patrilineages underwent a recent continent-wide expansion. Resequencing of 3.7 Mb of MSY DNA in 334 males, comprising 17 European and Middle Eastern populations, defines a phylogeny containing 5,996 single-nucleotide polymorphisms. Dating indicates that three major lineages (I1, R1a and R1b), accounting for 64% of our sample, have very recent coalescent times, ranging between 3.5 and 7.3 KYA. A continuous swathe of 13/17 populations share similar histories featuring a demographic expansion starting ∼ 2.1-4.2 KYA. Our results are compatible with ancient MSY DNA data, and contrast with data on mitochondrial DNA, indicating a widespread male-specific phenomenon that focuses interest on the social structure of Bronze Age Europe.

Indexed as

Sequence Analysis, DNABayes TheoremBiological EvolutionComputer SimulationDemographyDNA, MitochondrialEmigration and ImmigrationEthnicityEuropeGenetics, PopulationGenetic VariationGenomicsGeographyHaplotypesHistory, AncientHumansDNA, Mitochondrial

Identifiers

PMID25988751
PMCPMC4441248
OpenAlexW2184399581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.