Evidence map›Paper›PMID 25987243›Full record

Trial reportThe pharmacogenomics journal2016

Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1*07:01.

L R Parham, L P Briley, L Li, J Shen, P J Newcombe, K S King, A J Slater, A Dilthey, Z Iqbal, G McVean and 3 more

Open access · hybridAbstract readClinical Trial, Phase IIIMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in The pharmacogenomics journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 62 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Review
  5. The involvement of hepatic cytochrome P450s in the cytotoxicity of lapatinib.Toxicological sciences : an official journal of the Society of Toxicology · 2023
    Article
  6. Review
  7. Article
  8. Review
  9. HLA-associated adverse drug reactions - scoping review.Clinical and translational science · 2021
    Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Interindividual Variation in CYP3A Activity Influences Lapatinib Bioactivation.Drug metabolism and disposition: the biological fate of chemicals · 2019
    Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Biomarkers of adverse drug reactions.Experimental biology and medicine (Maywood, N.J.) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

L R ParhamGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
L P BrileyGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
L LiGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
J ShenGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
P J NewcombeGlaxoSmithKline Research & Development, Stevenage, UK.
K S KingGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
A J SlaterGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
A DiltheyDepartment of Statistics, University of Oxford, Oxford, UK.
Z IqbalDepartment of Statistics, University of Oxford, Oxford, UK.
G McVeanDepartment of Statistics, University of Oxford, Oxford, UK.
C J CoxGlaxoSmithKline Research & Development, Stevenage, UK.
M R NelsonGlaxoSmithKline Research & Development, Research Triangle Park, NC, USA.
C F SpraggsGlaxoSmithKline Research & Development, Stevenage, UK.
Research Triangle Park Foundation · USGlaxoSmithKline (United States) · USUniversity of Oxford · GBAge UK · GBGlaxoSmithKline (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lapatinib is associated with a low incidence of serious liver injury. Previous investigations have identified and confirmed the Class II allele HLA-DRB1*07:01 to be strongly associated with lapatinib-induced liver injury; however, the moderate positive predictive value limits its clinical utility. To assess whether additional genetic variants located within the major histocompatibility complex locus or elsewhere in the genome may influence lapatinib-induced liver injury risk, and potentially lead to a genetic association with improved predictive qualities, we have taken two approaches: a genome-wide association study and a whole-genome sequencing study. This evaluation did not reveal additional associations other than the previously identified association for HLA-DRB1*07:01. The present study represents the most comprehensive genetic evaluation of drug-induced liver injury (DILI) or hypersensitivity, and suggests that investigation of possible human leukocyte antigen associations with DILI and other hypersensitivities represents an important first step in understanding the mechanism of these events.

Indexed as

Alanine TransaminaseAllelesAntineoplastic AgentsBreast NeoplasmsCase-Control StudiesChemical and Drug Induced Liver InjuryErbB ReceptorsFemaleGenome-Wide Association StudyHLA-DRB1 ChainsHumansHyperbilirubinemiaINDEL MutationLapatinibPolymorphism, Single NucleotideQuinazolinesAlanine TransaminaseAntineoplastic AgentsErbB ReceptorsHLA-DRB1*07:01:01 antigenHLA-DRB1 ChainsLapatinibQuinazolines

Identifiers

PMID25987243
PMCPMC4819766
OpenAlexW1544937500

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.