Evidence map›Paper›PMID 25987242›Full record

ArticleThe pharmacogenomics journal2016

A common polymorphism in the ABCB1 gene is associated with side effects of PGP-dependent antidepressants in a large naturalistic Dutch cohort.

P M Bet, E C Verbeek, Y Milaneschi, D B M Straver, T Uithuisje, M R Bevova, J G Hugtenburg, P Heutink, B W J H Penninx, W J G Hoogendijk

Abstract read
PubMed Publisher
In one paragraph

Article in The pharmacogenomics journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

P M BetDepartment of Clinical Pharmacology and Pharmacy, VU University Medical Center, Amsterdam, The Netherlands.
E C VerbeekDepartment of Clinical Genetics, VU University Medical Center, Amsterdam, The Netherlands.
Y MilaneschiEMGO Institute, VU University Medical Center, Amsterdam, The Netherlands.
D B M StraverDepartment of Clinical Pharmacology and Pharmacy, VU University Medical Center, Amsterdam, The Netherlands.
T UithuisjeDepartment of Clinical Genetics, VU University Medical Center, Amsterdam, The Netherlands.
M R BevovaEuropean Research Institute for the Biology of Ageing, University Medical Center Groningen, Groningen, The Netherlands.
J G HugtenburgDepartment of Clinical Pharmacology and Pharmacy, VU University Medical Center, Amsterdam, The Netherlands.
P HeutinkGenome Biology of Neurodegenerative Diseases, German Center for Neurodegenerative Diseases, Tübingen, Germany.
B W J H PenninxNeuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands.
W J G HoogendijkNeuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands.
Amsterdam UMC Location VUmc · NLUniversity Medical Center Groningen · NLAmsterdam Neuroscience · NLGerman Center for Neurodegenerative Diseases · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The drug efflux transporter permeability glycoprotein (PGP) and cytochrome P450 (CYP) 2C19 are important for eliminating antidepressants from the brain and body. The ABCB1 gene, encoding for PGP, and CYP2C19 gene have several variants that could influence enzyme function and thereby the effect of PGP- and 2C19-dependent antidepressants. We investigated the association of antidepressant side effect and common genetic variation in 789 antidepressant users. In PGP-dependent antidepressant users, the A-allele of the rs2032588 single-nucleotide polymorphism (SNP) was associated with a lower number of side effects after adjusting for gender, age, dosage and duration of use, (B=-0.44, q=4.6 × 10(-3)). This association was different from and absent in non-PGP-dependent antidepressant users. Other SNP associations as well as an interaction analysis between the rs2032588 SNP and the CYP2C19 SNPs were not statistically significant after adjusting for covariates and multiple comparisons. The association of rs2032588 with antidepressant side effects suggests the involvement of the ABCB1 genotype in the clinical pharmacology of PGP-dependent antidepressants.

Indexed as

AdultAntidepressive AgentsATP Binding Cassette Transporter, Subfamily BCohort StudiesCytochrome P-450 CYP2C19FemaleGenetic Association StudiesHumansMaleMiddle AgedPolymorphism, Single NucleotideABCB1 protein, humanAntidepressive AgentsATP Binding Cassette Transporter, Subfamily BCytochrome P-450 CYP2C19

Identifiers

PMID25987242
OpenAlexW1592282236

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.