Evidence map›Paper›PMID 25986936›Full record

ArticleMethods (San Diego, Calif.)2016

Informatic deconvolution of biased GPCR signaling mechanisms from in vivo pharmacological experimentation.

Stuart Maudsley, Bronwen Martin, Jonathan Janssens, Harmonie Etienne, Areta Jushaj, Jaana van Gastel, Ann Willemsen, Hongyu Chen, Diane Gesty-Palmer, Louis M Luttrell

Open access · greenAbstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

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  10. G Protein-Coupled Receptor Systems and Their Role in Cellular Senescence.Computational and structural biotechnology journal · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Stuart MaudsleyTranslational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium; Laboratory of Neurogenetics, Institute Born Bunge, University of Antwerp, Antwerp, Belgium. Electronic address: stuart.maudsley@molgen.vib-ua.be.
Bronwen MartinMetabolism Unit, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
Jonathan JanssensTranslational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium; Laboratory of Neurogenetics, Institute Born Bunge, University of Antwerp, Antwerp, Belgium.
Harmonie EtienneTranslational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium; Laboratory of Neurogenetics, Institute Born Bunge, University of Antwerp, Antwerp, Belgium.
Areta JushajTranslational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium; Laboratory of Neurogenetics, Institute Born Bunge, University of Antwerp, Antwerp, Belgium.
Jaana van GastelTranslational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium.
Ann WillemsenTranslational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium.
Hongyu ChenDartmouth College, Hanover, NH 03755, USA.
Diane Gesty-PalmerDuke University Medical Center, Duke University, Durham, NC 27705, USA.
Louis M LuttrellMedical University of South Carolina, Charleston, SC 29425, USA.
University of Antwerp · BEDartmouth College · USDuke University Hospital · USMedical University of South Carolina · USNational Institutes of Health · USVIB-UAntwerp Center for Molecular Neurology · BE

Funding

Interdisciplinary Research Careers in Women's HealthK12HD043446 · NICHD · DUKE UNIVERSITY · PI AMUNDSEN, CINDY · 2002 to 2023
$9.6M
TYROSINE KINASES IN G PROTEIN MEDIATED SIGNALINGR01DK055524 · NIDDK · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LUTTRELL, LOUIS M · 1998 to 2017
$4.6M
Pharmacodynamics of Biased G protein-Coupled Receptor AgonismR01GM095497 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LUTTRELL, LOUIS M · 2013 to 2016
$1.1M
Age and pathology-induced alteration of G protein-coupled receptor signalingZ01AG000318 · NIA · NATIONAL INSTITUTE ON AGING · PI MAUDSLEY, STUART · 2007 to 2008
$905k
Development of novel methods for systems biology of metabolism and agingZIAAG000916 · NIA · NATIONAL INSTITUTE ON AGING · PI MARTIN, BRONWEN · 2010 to 2012
$518k
Intramural NIH HHS Z01 AG000318NIA NIH HHS AG000916-01NICHD NIH HHS K12 HD043446NICHD NIH HHS T32-HD043446NIDDK NIH HHS R01 DK055524NIDDK NIH HHS R01-DK055524NIGMS NIH HHS R01 GM095497NIGMS NIH HHS R01-GM095497
6 · The paper itself

Abstract

Ligands possessing different physico-chemical structures productively interact with G protein-coupled receptors generating distinct downstream signaling events due to their abilities to activate/select idiosyncratic receptor entities ('receptorsomes') from the full spectrum of potential receptor partners. We have employed multiple novel informatic approaches to identify and characterize the in vivo transcriptomic signature of an arrestin-signaling biased ligand, [D-Trp(12),Tyr(34)]-bPTH(7-34), acting at the parathyroid hormone type 1 receptor (PTH1R), across six different murine tissues after chronic drug exposure. We are able to demonstrate that [D-Trp(12),Tyr(34)]-bPTH(7-34) elicits a distinctive arrestin-signaling focused transcriptomic response that is more coherently regulated, in an arrestin signaling-dependent manner, across more tissues than that of the pluripotent endogenous PTH1R ligand, hPTH(1-34). This arrestin-focused response signature is strongly linked with the transcriptional regulation of cell growth and development. Our informatic deconvolution of a conserved arrestin-dependent transcriptomic signature from wild type mice demonstrates a conceptual framework within which the in vivo outcomes of biased receptor signaling may be further investigated or predicted.

Indexed as

AnimalsCattleGene Regulatory NetworksHumansInformaticsMaleMiceMice, Inbred C57BLParathyroid HormoneReceptor, Parathyroid Hormone, Type 1Receptors, G-Protein-CoupledSignal TransductionParathyroid HormoneReceptor, Parathyroid Hormone, Type 1Receptors, G-Protein-CoupledArrestinG protein-coupled receptorInformaticIn vivoSignaling biasTranscriptome

Identifiers

PMID25986936
PMCPMC4646739
OpenAlexW349780053

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.