Evidence map›Paper›PMID 25986128›Full record

ArticlePlant physiology2015

A Feedback-Insensitive Isopropylmalate Synthase Affects Acylsugar Composition in Cultivated and Wild Tomato.

Jing Ning, Gaurav D Moghe, Bryan Leong, Jeongwoon Kim, Itai Ofner, Zhenzhen Wang, Christopher Adams, A Daniel Jones, Dani Zamir, Robert L Last

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
11.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 98 citations in OpenAlex.

  1. Article
  2. Review
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  5. Article
  6. Evolution of plant metabolism: the state-of-the-art.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  7. Evolution of aromatic amino acid metabolism in plants: a key driving force behind plant chemical diversity in aromatic natural products.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  8. Article
  9. Article
  10. Trading acyls and swapping sugars: metabolic innovations inbioRxiv : the preprint server for biology · 2024
    Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jing NingDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).
Gaurav D MogheDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).ORCID http://orcid.org/0000-0002-8761-064X
Bryan LeongDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).ORCID http://orcid.org/0000-0003-4042-1160
Jeongwoon KimDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).ORCID http://orcid.org/0000-0002-7102-6799
Itai OfnerDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).
Zhenzhen WangDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).
Christopher AdamsDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).
A Daniel JonesDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).ORCID http://orcid.org/0000-0002-7408-6690
Dani ZamirDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.).
Robert L LastDepartment of Biochemistry and Molecular Biology (J.N., G.D.M., B.L., Z.W., A.D.J., R.L.L.), Department of Plant Biology (J.K., R.L.L.), and Department of Chemistry (A.D.J.), Michigan State University, East Lansing, Michigan 48824;Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot 76100, Israel (I.O., D.Z.); andDepartment of Biochemistry, St. Mary's College of Maryland, St. Mary's City, Maryland 20686 (C.A.) lastr@msu.edu.ORCID http://orcid.org/0000-0001-6974-9587
Hebrew University of Jerusalem · IL

Funding

Plant Biotechnology for Health and SustainabilityT32GM110523 · NIGMS · MICHIGAN STATE UNIVERSITY · PI LAST, ROBERT LOUIS · 2014 to 2023
$2.2M
NIGMS NIH HHS T32 GM110523NIGMS NIH HHS T32-GM110523
6 · The paper itself

Abstract

Acylsugars are insecticidal specialized metabolites produced in the glandular trichomes of plants in the Solanaceae family. In the tomato clade of the Solanum genus, acylsugars consist of aliphatic acids of different chain lengths esterified to sucrose, or less frequently to glucose. Through liquid chromatography-mass spectrometry screening of introgression lines, we previously identified a region of chromosome 8 in the Solanum pennellii LA0716 genome (IL8-1/8-1-1) that causes the cultivated tomato Solanum lycopersicum to shift from producing acylsucroses with abundant 3-methylbutanoic acid acyl chains derived from leucine metabolism to 2-methylpropanoic acid acyl chains derived from valine metabolism. We describe multiple lines of evidence implicating a trichome-expressed gene from this region as playing a role in this shift. S. lycopersicum M82 SlIPMS3 (Solyc08g014230) encodes a functional end product inhibition-insensitive version of the committing enzyme of leucine biosynthesis, isopropylmalate synthase, missing the carboxyl-terminal 160 amino acids. In contrast, the S. pennellii LA0716 IPMS3 allele found in IL8-1/8-1-1 encodes a nonfunctional truncated IPMS protein. M82 transformed with an SlIPMS3 RNA interference construct exhibited an acylsugar profile similar to that of IL8-1-1, whereas the expression of SlIPMS3 in IL8-1-1 partially restored the M82 acylsugar phenotype. These IPMS3 alleles are polymorphic in 14 S. pennellii accessions spread throughout the geographical range of occurrence for this species and are associated with acylsugars containing varying amounts of 2-methylpropanoic acid and 3-methylbutanoic acid acyl chains.

Indexed as

2-Isopropylmalate SynthaseAcylationAllelesBase SequenceCarbohydratesChromatography, LiquidFatty AcidsKineticsMass SpectrometryMolecular Sequence DataPhylogenyPlant ProteinsSequence Analysis, DNASolanumSolanum lycopersicumSucrose2-Isopropylmalate SynthaseCarbohydratesFatty AcidsPlant ProteinsSucrose

Identifiers

PMID25986128
PMCPMC4634047
OpenAlexW1913722666

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.