Evidence map›Paper›PMID 25985302›Full record

ArticlePloS one2015

The Arabidopsis KH-Domain RNA-Binding Protein ESR1 Functions in Components of Jasmonate Signalling, Unlinking Growth Restraint and Resistance to Stress.

Louise F Thatcher, Lars G Kamphuis, James K Hane, Luis Oñate-Sánchez, Karam B Singh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 63 citations in OpenAlex.

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  12. TwoFrontiers in plant science · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Louise F ThatcherCSIRO Agriculture Flagship, Centre for Environment and Life Sciences, Wembley, Western Australia, Australia.
Lars G KamphuisCSIRO Agriculture Flagship, Centre for Environment and Life Sciences, Wembley, Western Australia, Australia; The Institute of Agriculture, The University of Western Australia, Crawley, Western Australia, Australia.
James K HaneCSIRO Agriculture Flagship, Centre for Environment and Life Sciences, Wembley, Western Australia, Australia.
Luis Oñate-SánchezCSIRO Agriculture Flagship, Centre for Environment and Life Sciences, Wembley, Western Australia, Australia.
Karam B SinghCSIRO Agriculture Flagship, Centre for Environment and Life Sciences, Wembley, Western Australia, Australia; The Institute of Agriculture, The University of Western Australia, Crawley, Western Australia, Australia.
Commonwealth Scientific and Industrial Research Organisation · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutathione S-transferases (GSTs) play important roles in the protection of cells against toxins and oxidative damage where one Arabidopsis member, GSTF8, has become a commonly used marker gene for early stress and defense responses. A GSTF8 promoter fragment fused to the luciferase reporter gene was used in a forward genetic screen for Arabidopsis mutants with up-regulated GSTF8 promoter activity. This identified the esr1-1 (enhanced stress response 1) mutant which also conferred increased resistance to the fungal pathogen Fusarium oxysporum. Through positional cloning, the ESR1 gene was found to encode a KH-domain containing RNA-binding protein (At5g53060). Whole transcriptome sequencing of esr1-1 identified altered expression of genes involved in responses to biotic and abiotic stimuli, hormone signaling pathways and developmental processes. In particular was an overall significant enrichment for jasmonic acid (JA) mediated processes in the esr1-1 down-regulated dataset. A subset of these genes were tested for MeJA inducibility and we found the expression of some but not all were reduced in esr1-1. The esr1-1 mutant was not impaired in other aspects of JA-signalling such as JA- sensitivity or development, suggesting ESR1 functions in specific components of the JA-signaling pathway. Examination of salicylic acid (SA) regulated marker genes in esr1-1 showed no increase in basal or SA induced expression suggesting repression of JA-regulated genes is not due to antagonistic SA-JA crosstalk. These results define new roles for KH-domain containing proteins with ESR1 unlinking JA-mediated growth and defense responses.

Indexed as

Stress, PhysiologicalAdaptation, PhysiologicalAllelesArabidopsisArabidopsis ProteinsCloning, MolecularCyclopentanesDisease ResistanceDown-RegulationFusariumGene Expression Regulation, PlantGene OntologyGlutathione TransferaseMutationOxylipinsPlant DiseasesArabidopsis ProteinsCyclopentanesESR1 protein, ArabidopsisGlutathione TransferaseGSTF8 protein, Arabidopsisjasmonic acidOxylipinsRecombinant Fusion ProteinsRNA-Binding ProteinsSalicylic AcidTranscription Factors

Identifiers

PMID25985302
PMCPMC4436139
OpenAlexW401579481

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.