Evidence map›Paper›PMID 25982282›Full record

ArticleOncogene2016

Frequent promoter hypermethylation of PTPRT increases STAT3 activation and sensitivity to STAT3 inhibition in head and neck cancer.

N D Peyser, M Freilino, L Wang, Y Zeng, H Li, D E Johnson, J R Grandis

Abstract read
In one paragraph

Article in Oncogene, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Review
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  4. Article
  5. Article
  6. Review
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  8. Article
  9. Review
  10. Forward Genetics in Apicomplexa Biology: The Host Side of the Story.Frontiers in cellular and infection microbiology · 2022
    Review
  11. Association ofBioMed research international · 2022
    Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Targeting the JAK/STAT pathway in solid tumors.Journal of cancer metastasis and treatment · 2020
    Article
  17. Article
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  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

N D PeyserDepartment of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
M FreilinoDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
L WangDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Y ZengDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
H LiDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
D E JohnsonDepartment of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
J R GrandisDepartment of Otolaryngology, University of California, San Francisco, CA, USA.
University of Pittsburgh · USUniversity of California, San Francisco · US

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
WILD TYPE P53-BASED ADJUVANT IMMUNOTHERAPY FOR SCCHNP50CA097190 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Greg M. Delgoffe · 2004 to 2026
$49.6M
STAT-Mediated TGFalpha EGFR Signaling in squamous cell carcinoma of head neckR01CA077308 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GRANDIS, JENNIFER RUBIN · 1998 to 2018
$5.0M
Genomic alteration of PTPRT in OSCC: Implications for STAT3 pathway targetingF31DE024007 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PEYSER, NOAH D · 2013 to 2014
$83k
NCATS NIH HHS UL1 TR000005NCI NIH HHS P50 CA097190NCI NIH HHS R01 CA077308NIDCR NIH HHS F31 DE024007
6 · The paper itself

Abstract

Signal transducer and activator of transcription 3 (STAT3) overactivation is a common event in many cancers, including head and neck squamous cell carcinoma (HNSCC), where STAT3 represents a promising therapeutic target. HNSCC is not characterized by frequent kinase mutations, in contrast to some malignancies where mutational activation of kinases upstream of STAT3 is common. Instead, STAT3 may be activated by loss-of-function of negative regulators of STAT3, including by promoter hypermethylation of PTPRT. Here we first analyzed The Cancer Genome Atlas data and determined that the PTPRT promoter is frequently hypermethylated in several cancers, including HNSCC (60.1% of tumors analyzed) in association with downregulation of PTPRT mRNA expression and upregulation of pSTAT3 expression. These findings were confirmed in an independent cohort of HNSCC tumors by methylation-specific PCR and immunohistochemistry. We demonstrate that PTPRT promoter methylation and gene silencing is reversible in HNSCC cells, leading to PTPRT-specific downregulation of pSTAT3 expression. We further show that PTPRT promoter methylation is significantly associated with sensitivity to STAT3 inhibition in HNSCC cells, suggesting that PTPRT promoter methylation may serve as a predictive biomarker for responsiveness to STAT3 inhibitors in clinical development.

Indexed as

Carcinoma, Squamous CellCell Line, TumorDNA MethylationGene Expression Regulation, NeoplasticHead and Neck NeoplasmsHumansPromoter Regions, GeneticReceptor-Like Protein Tyrosine Phosphatases, Class 2Signal TransductionSquamous Cell Carcinoma of Head and NeckSTAT3 Transcription FactorPTPRT protein, humanReceptor-Like Protein Tyrosine Phosphatases, Class 2STAT3 protein, humanSTAT3 Transcription Factor

Identifiers

PMID25982282
PMCPMC4651851
OpenAlexW2119568822

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.