Evidence map›Paper›PMID 25982128›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

Allelic variants in the PRR37 gene and the human-mediated dispersal and diversification of sorghum.

Robert R Klein, Frederick R Miller, Diana V Dugas, Patrick J Brown, A Millie Burrell, Patricia E Klein

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Genes and pathways determining flowering time variation in temperate-adapted sorghum.The Plant journal : for cell and molecular biology · 2025
    Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Isolation and identification ofFrontiers in plant science · 2022
    Article
  8. High-depth resequencing of 312 accessions reveals the local adaptation of foxtail millet.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  9. Article
  10. Article
  11. Positional Cloning of the Flowering Time QTLFrontiers in plant science · 2019
    Article
  12. Genomic and environmental determinants and their interplay underlying phenotypic plasticity.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Robert R KleinUnited States Department of Agriculture-Agricultural Research Service, and Institute for Plant Genomics and Biotechnology, Texas A&M University, College Station, TX, 77843, USA.
Frederick R Miller
Diana V Dugas
Patrick J Brown
A Millie Burrell
Patricia E Klein
Agricultural Research Service · USTexas A&M University · USUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageAllele phylogenetic analysis of the sorghum flowering-time gene PRR37 provided new insight into the human-mediated selection of a key adaptive gene that occurred during sorghum's diversification and worldwide dispersal. The domestication and spread of the tropical cereal sorghum is associated with the historic movement of humans. We show that an allelic series at PRR37 (pseudo-response regulator 37), a circadian clock-associated transcription factor, was selected in long-day ecosystems worldwide to permit floral initiation and grain production. We identified a series of loss-of-function (photoperiod-insensitive) alleles encoding truncated PRR37 proteins, alleles with key amino acid substitutions in the pseudo-receiver domain, and a novel splice variant in which the pseudo-receiver domain is truncated. Each PRR37 allelic variant was traced to a specific geographic location or specialized agronomic type. We present a graphical model that shows evidence of human selection and gene flow of the PRR37 allelic variants during the global dispersal and agronomic diversification of sorghum. With the recent identification of the Ghd7 gene as an important regulator of flowering date in sorghum, we briefly examine whether loss-of-function Ghd7 allelic variants were selected prior to the human-mediated movement of sorghum from its equatorial center of origin to temperate climates worldwide.

Indexed as

Genes, PlantGenetic VariationAllelesCLOCK ProteinsDNA, PlantFlowersGene Expression Regulation, PlantGene FlowHaplotypesPhotoperiodPhylogenyPlant BreedingPlant ProteinsSelection, GeneticSequence Analysis, DNASorghumCLOCK ProteinsDNA, PlantPlant ProteinsTranscription Factors

Identifiers

PMID25982128
OpenAlexW2468517834

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.