Evidence map›Paper›PMID 25980011›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2015

Amino acid metabolism inhibits antibody-driven kidney injury by inducing autophagy.

Kapil Chaudhary, Rahul Shinde, Haiyun Liu, Jaya P Gnana-Prakasam, Rajalakshmi Veeranan-Karmegam, Lei Huang, Buvana Ravishankar, Jillian Bradley, Nino Kvirkvelia, Malgorzata McMenamin and 5 more

Abstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. IDOTransplantation direct · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. The amino acid sensor GCN2 controls red blood cell clearance and iron metabolism through regulation of liver macrophages.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. TheFrontiers in genetics · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Kapil ChaudharyCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Rahul ShindeCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Haiyun LiuCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Jaya P Gnana-PrakasamSignaling and Angiogenesis Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Rajalakshmi Veeranan-KarmegamSignaling and Angiogenesis Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Lei HuangCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912; Department of Radiology, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912;
Buvana RavishankarCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Jillian BradleyCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Nino KvirkveliaDepartment of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912; and.
Malgorzata McMenaminDepartment of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912; and.
Wei XiaoCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Daniel KlevenDepartment of Pathology, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912.
Andrew L MellorCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912; Department of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912; and.
Michael P MadaioDepartment of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912; and.
Tracy L McGahaCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912; Department of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912; and tmcgaha@gru.edu.
Augusta University · USGeorgia Regents Medical Center · USNational Cancer Center of Georgia · GE

Funding

Mechanistic relationships between IDO, GCN2, and mTOR signals in immunity to apoptotic cellsR01AR067763 · NIAMS · UNIVERSITY HEALTH NETWORK · PI MCGAHA, TRACY L · 2015 to 2019
$1.2M
Modified Human Anti-a(3) IV Antibodies for Drug Delivery in NephritisR21DK081140 · NIDDK · AUGUSTA UNIVERSITY · PI MADAIO, MICHAEL P · 2009 to 2010
$404k
The role of GCN2-kinase in antigen presenting cell function and tolerance to selfR21AI105500 · NIAID · AUGUSTA UNIVERSITY · PI MCGAHA, TRACY L · 2013 to 2014
$399k
Mechanisms of marginal zone macrophage mediated tolerance towards apoptotic cellR56AI099043 · NIAID · AUGUSTA UNIVERSITY · PI MCGAHA, TRACY L · 2013 to 2013
$353k
The role of indoleamine 2-3 dioxygenase in marginal zone-mediated toleranceR56AI092213 · NIAID · AUGUSTA UNIVERSITY · PI MCGAHA, TRACY L · 2011 to 2011
$335k
NIAID NIH HHS AI092213NIAID NIH HHS AI099043NIAID NIH HHS AI105500NIAID NIH HHS R21 AI105500NIAID NIH HHS R56 AI092213NIAID NIH HHS R56 AI099043NIAMS NIH HHS R01 AR067763NIDDK NIH HHS DK081140NIDDK NIH HHS R21 DK081140
6 · The paper itself

Abstract

Inflammatory kidney disease is a major clinical problem that can result in end-stage renal failure. In this article, we show that Ab-mediated inflammatory kidney injury and renal disease in a mouse nephrotoxic serum nephritis model was inhibited by amino acid metabolism and a protective autophagic response. The metabolic signal was driven by IFN-γ-mediated induction of indoleamine 2,3-dioxygenase 1 (IDO1) enzyme activity with subsequent activation of a stress response dependent on the eIF2α kinase general control nonderepressible 2 (GCN2). Activation of GCN2 suppressed proinflammatory cytokine production in glomeruli and reduced macrophage recruitment to the kidney during the incipient stage of Ab-induced glomerular inflammation. Further, inhibition of autophagy or genetic ablation of Ido1 or Gcn2 converted Ab-induced, self-limiting nephritis to fatal end-stage renal disease. Conversely, increasing kidney IDO1 activity or treating mice with a GCN2 agonist induced autophagy and protected mice from nephritic kidney damage. Finally, kidney tissue from patients with Ab-driven nephropathy showed increased IDO1 abundance and stress gene expression. Thus, these findings support the hypothesis that the IDO-GCN2 pathway in glomerular stromal cells is a critical negative feedback mechanism that limits inflammatory renal pathologic changes by inducing autophagy.

Indexed as

Amino AcidsAnimalsAnti-Glomerular Basement Membrane DiseaseAutoantibodiesAutophagyCytokinesDisease Models, AnimalEnzyme ActivationFemaleHumansIndoleamine-Pyrrole 2,3,-DioxygenaseMiceMice, KnockoutPodocytesProtein Serine-Threonine KinasesSignal TransductionAmino AcidsAutoantibodiesCytokinesEif2ak4 protein, mouseIDO1 protein, mouseIndoleamine-Pyrrole 2,3,-DioxygenaseProtein Serine-Threonine Kinases

Identifiers

PMID25980011
PMCPMC4458436
OpenAlexW1753252240

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.