Evidence map›Paper›PMID 25978546›Full record

ArticleThe ISME journal2016

Elemental sulfur and acetate can support life of a novel strictly anaerobic haloarchaeon.

Dimitry Y Sorokin, Ilya V Kublanov, Sergei N Gavrilov, David Rojo, Pawel Roman, Peter N Golyshin, Vladlen Z Slepak, Francesco Smedile, Manuel Ferrer, Enzo Messina and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Halophilic archaea as tools for bioremediation technologies.Applied microbiology and biotechnology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 6 countries.

Dimitry Y SorokinWinogradsky Institute of Microbiology, Russian Academy of Sciences, Moscow, Russia.
Ilya V KublanovWinogradsky Institute of Microbiology, Russian Academy of Sciences, Moscow, Russia.
Sergei N GavrilovWinogradsky Institute of Microbiology, Russian Academy of Sciences, Moscow, Russia.
David RojoCenter for Metabolomics and Bioanalysis, Faculty of Pharmacy, CEU San Pablo University, Boadilla del Monte, Spain.
Pawel RomanSub-department of Environmental Technology, Wageningen University, Wageningen, The Netherlands.
Peter N GolyshinSchool of Biological Sciences, Bangor University, Gwynedd, UK.
Vladlen Z SlepakDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA.
Francesco SmedileInstitute for Coastal Marine Environment, CNR, Messina, Italy.
Manuel FerrerInstitute of Catalysis, CSIC, Madrid, Spain.
Enzo MessinaInstitute for Coastal Marine Environment, CNR, Messina, Italy.
Violetta La ConoInstitute for Coastal Marine Environment, CNR, Messina, Italy.
Michail M YakimovInstitute for Coastal Marine Environment, CNR, Messina, Italy.
Institute for Coastal Marine Environment · ITRussian Academy of Sciences · RUBangor University · GBInstituto de Catálisis y Petroleoquímica · ESUniversidad San Pablo CEU · ESUniversity of Miami · USWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Archaea domain is comprised of many versatile taxa that often colonize extreme habitats. Here, we report the discovery of strictly anaerobic extremely halophilic euryarchaeon, capable of obtaining energy by dissimilatory reduction of elemental sulfur using acetate as the only electron donor and forming sulfide and CO2 as the only products. This type of respiration has never been observed in hypersaline anoxic habitats and is the first example of such metabolic capability in the entire Archaea domain. We isolated and cultivated these unusual organisms, selecting one representative strain, HSR2, for detailed characterization. Our studies including physiological tests, genome sequencing, gene expression, metabolomics and [(14)C]-bicarbonate assimilation assays revealed that HSR2 oxidized acetate completely via the tricarboxylic acid cycle. Anabolic assimilation of acetate occurred via activated glyoxylate bypass and anaplerotic carboxylation. HSR2 possessed sulfurtransferase and an array of membrane-bound polysulfide reductase genes, all of which were expressed during the growth. Our findings suggest the biogeochemical contribution of haloarchaea in hypersaline anoxic environments must be reconsidered.

Indexed as

AcetatesAnaerobiosisArchaeaArchaeal ProteinsOxidation-ReductionOxidoreductasesSulfidesSulfurAcetatesArchaeal ProteinsOxidoreductasespolysulfide reductaseSulfidesSulfur

Identifiers

PMID25978546
PMCPMC4681856
OpenAlexW347911937

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.