Evidence map›Paper›PMID 25978455›Full record

ArticlePloS one2015

Transcriptional Dynamics of Immortalized Human Mesenchymal Stem Cells during Transformation.

Masao Takeuchi, Atsunori Higashino, Kikuko Takeuchi, Yutaro Hori, Kazuko Koshiba-Takeuchi, Hatsune Makino, Yoko Monobe, Marina Kishida, Jun Adachi, Jun Takeuchi and 4 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Generation of Mesenchymal Cell Lines Derived from Aged Donors.International journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Use of human bone marrow mesenchymal stem cells immortalized by the expression of telomerase in wound healing in diabetic rats.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2021
    Article
  8. Article
  9. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Masao TakeuchiSection of Laboratory Equipment, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
Atsunori HigashinoCenter for Human Evolution Modeling Research, Primate Research Institute, Kyoto University, Kyoto, Japan.
Kikuko TakeuchiSection of Laboratory Equipment, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
Yutaro HoriDivision of Cardiovascular Regeneration, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan; Department of Biological Science, Graduate School Science, The University of Tokyo, Tokyo, Japan.
Kazuko Koshiba-TakeuchiDivision of Cardiovascular Regeneration, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Hatsune MakinoDivision of Cardiovascular Regeneration, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan; Department of Reproductive Biology and Pathology National Research Institute for Child Health and Development, Tokyo, Japan.
Yoko MonobeSection of Laboratory Equipment, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
Marina KishidaLaboratory of Proteome Research, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
Jun AdachiLaboratory of Proteome Research, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
Jun TakeuchiDivision of Cardiovascular Regeneration, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan; Department of Biological Science, Graduate School Science, The University of Tokyo, Tokyo, Japan; PRESTO, Japan Science and Technology of Agency, Tokyo, Japan.
Takeshi TomonagaLaboratory of Proteome Research, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
Akihiro UmezawaDepartment of Reproductive Biology and Pathology National Research Institute for Child Health and Development, Tokyo, Japan.
Yosuke KameokaCentral Institute, A-CLIP Institutes, Chiba-shi, Chiba, Japan.
Ken-Ichi AkagiSection of Laboratory Equipment, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki-shi, Osaka, Japan.
National Institute of Biomedical Innovation, Health and Nutrition · JPNational Center For Child Health and Development · JPThe University of Tokyo · JPJapan Science and Technology Agency · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comprehensive analysis of alterations in gene expression along with neoplastic transformation in human cells provides valuable information about the molecular mechanisms underlying transformation. To further address these questions, we performed whole transcriptome analysis to the human mesenchymal stem cell line, UE6E7T-3, which was immortalized with hTERT and human papillomavirus type 16 E6/E7 genes, in association with progress of transformation in these cells. At early stages of culture, UE6E7T-3 cells preferentially lost one copy of chromosome 13, as previously described; in addition, tumor suppressor genes, DNA repair genes, and apoptosis-activating genes were overexpressed. After the loss of chromosome 13, additional aneuploidy and genetic alterations that drove progressive transformation, were observed. At this stage, the cell line expressed oncogenes as well as genes related to anti-apoptotic functions, cell-cycle progression, and chromosome instability (CIN); these pro-tumorigenic changes were concomitant with a decrease in tumor suppressor gene expression. At later stages after prolong culture, the cells exhibited chromosome translocations, acquired anchorage-independent growth and tumorigenicity in nude mice, (sarcoma) and exhibited increased expression of genes encoding growth factor and DNA repair genes, and decreased expression of adhesion genes. In particular, glypican-5 (GPC5), which encodes a cell-surface proteoglycan that might be a biomarker for sarcoma, was expressed at high levels in association with transformation. Patched (Ptc1), the cell surface receptor for hedgehog (Hh) signaling, was also significantly overexpressed and co-localized with GPC5. Knockdown of GPC5 expression decreased cell proliferation, suggesting that it plays a key role in growth in U3-DT cells (transformants derived from UE6E7T-3 cells) through the Hh signaling pathway. Thus, the UE6E7T-3 cell culture model is a useful tool for assessing the functional contribution of genes showed by expression profiling to the neoplastic transformation of human fibroblasts and human mesenchymal stem cells (hMSC).

Indexed as

AneuploidyAnimalsCell Culture TechniquesCell CycleCell ProliferationCell Transformation, NeoplasticCell Transformation, ViralChromosomal InstabilityChromosomes, Human, Pair 13DNA RepairFibroblastsGlypicansHedgehogsHuman papillomavirus 6HumansMesenchymal Stem CellsGlypicansGPC5 protein, humanTelomeraseTERT protein, human

Identifiers

PMID25978455
PMCPMC4433180
OpenAlexW295044603

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.