Evidence map›Paper›PMID 25978358›Full record

ArticlePloS one2015

A Drosophila Reporter for the Translational Activation of ATF4 Marks Stressed Cells during Development.

Kwonyoon Kang, Hyung Don Ryoo, Jung-Eun Park, Jee-Hyun Yoon, Min-Ji Kang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 56 citations in OpenAlex.

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  14. Drosophila Unfolded Protein Response (UPR) Assays In Vitro and In Vivo.Methods in molecular biology (Clifton, N.J.) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Kwonyoon KangDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Hyung Don RyooDepartment of Cell Biology, New York University School of Medicine, New York, New York, United States of America.
Jung-Eun ParkDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Jee-Hyun YoonDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Min-Ji KangDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Ulsan College · KRNew York University · USUniversity of Ulsan · KR

Funding

Unfolded Protein Response in Eye Development and DiseaseR01EY020866 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HYUNG D RYOO · 2010 to 2026
$6.9M
NEI NIH HHS R01 EY020866
6 · The paper itself

Abstract

Eukaryotic cells have evolved signaling pathways that help to restore cellular homeostasis in response to various physiological or pathological conditions. ATF4 is a transcription factor whose mRNA translation is stimulated in response to stress-activated eIF2alpha kinases. Established conditions that activate eIF2alpha phosphorylation and ATF4 translation include excessive stress in the endoplasmic reticulum (ER) and amino acid deprivation. ATF4 is activated through a unique translational activation mechanism that involves multiple upstream open reading frames (uORFs) in the 5'-untranslated region (UTR), which is conserved from yeast to mammals. Taking advantage of this, we developed a translational activation reporter of ATF4 in Drosophila, in which the dsRed reporter coding sequence was placed downstream of the Drosophila ATF4 5' UTR. This reporter remained inactive in most tissues under normal conditions, but showed dsRed expression when starved, or when challenged with conditions that imposed ER stress. In normally developing flies, a small number of cell types showed reporter expression even without exogenous stress, which included the salivary gland, gut, the male reproductive organ, and the photoreceptor cells, suggestive of inherent stress during the normal development of these cell types. These results establish a new tool to study ATF4-mediated stress response in Drosophila development and disease.

Indexed as

5' Untranslated RegionsActivating Transcription Factor 4AnimalsDrosophilaDrosophila ProteinsEndoplasmic ReticulumEndoplasmic Reticulum StressMaleOpen Reading FramesPhotoreceptor CellsReverse Transcriptase Polymerase Chain ReactionSalivary Glands5' Untranslated RegionsActivating Transcription Factor 4Drosophila Proteins

Identifiers

PMID25978358
PMCPMC4433282
OpenAlexW251973328

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.