Evidence map›Paper›PMID 25978061›Full record

ArticlePloS one2015

Immunoproteasome deficiency protects in the retina after optic nerve crush.

Nathan J Schuld, Stacy A Hussong, Rebecca J Kapphahn, Ute Lehmann, Heidi Roehrich, Abrar A Rageh, Neal D Heuss, Wendy Bratten, Dale S Gregerson, Deborah A Ferrington

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
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  7. Article
  8. PDGF-D-induced immunoproteasome activation and cell-cell interactions.Computational and structural biotechnology journal · 2023
    Article
  9. Review
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  11. Ablation of Immunoproteasome β5i Subunit Suppresses Hypertensive Retinopathy by Blocking ATRAP Degradation in Mice.Molecular therapy : the journal of the American Society of Gene Therapy · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Nathan J SchuldDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
Stacy A HussongDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America; Graduate Program in Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, Minnesota, United States of America.
Rebecca J KapphahnDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
Ute LehmannDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America; Graduate Program in Microbiology, Immunology and Cancer Biology, University of Minnesota, Minneapolis, Minnesota, United States of America.
Heidi RoehrichHistology Core for Vision Research, University of Minnesota, Minneapolis, Minnesota, United States of America.
Abrar A RagehDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
Neal D HeussDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
Wendy BrattenDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
Dale S GregersonDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
Deborah A FerringtonDepartment of Ophthalmology and Visual Neurosciences, University of Minnesota, Minneapolis, Minnesota, United States of America.
University of Minnesota · US

Funding

Visual TestingP30EY011374 · NEI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI NEWMAN, ERIC A · 1996 to 2019
$8.8M
Training Grant: Functional Proteomics of AgingT32AG029796 · NIA · UNIVERSITY OF MINNESOTA · PI EDGAR A ARRIAGA, Douglas G Mashek · 2008 to 2026
$6.6M
SIGNIFICANCE OF IMMUNOLOGICAL SEQUESTRATION IN THE EYER01EY011542 · NEI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI GREGERSON, DALE SANNES · 1996 to 2010
$3.8M
Proteasome Function in the Aging RetinaR01EY013623 · NEI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI FERRINGTON, DEBORAH ANN · 2003 to 2010
$2.2M
VISUAL NEUROSCIENCE TRAINING PROGRAMT32EY007133 · NEI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MCLOON, STEVEN C · 1991 to 2010
$2.0M
Immune-mediated Neuroprotection of Retinal Ganglion CellsR01EY021003 · NEI · UNIVERSITY OF MINNESOTA · PI GREGERSON, DALE SANNES · 2010 to 2012
$1.3M
Immunoproteasome: A key component of the cellular stress responseR21AG032391 · NIA · UNIVERSITY OF MINNESOTA · PI FERRINGTON, DEBORAH ANN · 2008 to 2009
$315k
NEI NIH HHS EY011542NEI NIH HHS EY013623NEI NIH HHS P30 EY011374NEI NIH HHS P30-EY11374NEI NIH HHS R01 EY011542NEI NIH HHS R01 EY013623NEI NIH HHS R01 EY021003NEI NIH HHS T32 EY007133NIA NIH HHS AG032391NIA NIH HHS R21 AG032391NIA NIH HHS T32 AG029796NIA NIH HHS T32-AG029796
6 · The paper itself

Abstract

The immunoproteasome is upregulated by disease, oxidative stress, and inflammatory cytokines, suggesting an expanded role for the immunoproteasome in stress signaling that goes beyond its canonical role in generating peptides for antigen presentation. The signaling pathways that are regulated by the immunoproteasome remain elusive. However, previous studies suggest a role for the immunoproteasome in the regulation of PTEN and NF-κB signaling. One well-known pathway upstream of NF-κB and downstream of PTEN is the Akt signaling pathway, which is responsible for mediating cellular survival and is modulated after optic nerve crush (ONC). This study investigated the role of retinal immunoproteasome after injury induced by ONC, focusing on the Akt cell survival pathway. Retinas or retinal pigment epithelial (RPE) cells from wild type (WT) and knockout (KO) mice lacking either one (LMP2) or two (LMP7 and MECL-1) catalytic subunits of the immunoproteasome were utilized in this study. We show that mRNA and protein levels of the immunoproteasome subunits are significantly upregulated in WT retinas following ONC. Mice lacking the immunoproteasome subunits show either a delayed or dampened apoptotic response as well as altered Akt signaling, compared to WT mice after ONC. Treatment of the RPE cells with insulin growth factor-1 (IGF-1) to stimulate Akt signaling confirmed that the immunoproteasome modulates this pathway, and most likely modulates parallel pathways as well. This study links the inducible expression of the immunoproteasome following retinal injury to Akt signaling, which is important in many disease pathways.

Indexed as

AnimalsCysteine EndopeptidasesEpithelial CellsFemaleInsulin-Like Growth Factor IMaleMiceMice, KnockoutNerve CrushNF-kappa BOptic NerveOxidative StressProteasome Endopeptidase ComplexProto-Oncogene Proteins c-aktPTEN PhosphohydrolaseRetinaCysteine EndopeptidasesInsulin-Like Growth Factor ILMP-2 proteinLMP7 proteinNF-kappa BProteasome Endopeptidase ComplexProto-Oncogene Proteins c-aktPsmb10 protein, mousePTEN PhosphohydrolasePten protein, mouse

Identifiers

PMID25978061
PMCPMC4433222
OpenAlexW228798924

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.