Evidence map›Paper›PMID 25977418›Full record

ArticleGenome announcements2015

Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the Oak Ridge Field Research Center Site.

Jayashree Ray, R Jordan Waters, Jeffrey M Skerker, Jennifer V Kuehl, Morgan N Price, Jiawen Huang, Romy Chakraborty, Adam P Arkin, Adam Deutschbauer

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Efficient Knocking Out of the Organophosphorus Insecticides Degradation GeneInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Article
  5. Draft Genome Sequence ofMicrobiology resource announcements · 2021
    Article
  6. Production of PHB From COFrontiers in microbiology · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jayashree RayPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
R Jordan WatersJoint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Jeffrey M SkerkerEnergy Biosciences Institute, University of California, Berkeley, Berkeley, California, USA.
Jennifer V KuehlPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Morgan N PricePhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Jiawen HuangEarth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Romy ChakrabortyEarth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Adam P Arkin
Adam DeutschbauerPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA amdeutschbauer@lbl.gov.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cupriavidus basilensis 4G11 was isolated from groundwater at the Oak Ridge Field Research Center (FRC) site. Here, we report the complete genome sequence and annotation of Cupriavidus basilensis 4G11. The genome contains 8,421,483 bp, 7,661 predicted protein-coding genes, and a total GC content of 64.4%.

Identifiers

PMID25977418
PMCPMC4432324

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.