Evidence map›Paper›PMID 25977367›Full record

ArticleDevelopment (Cambridge, England)2015

Compensatory branching morphogenesis of stalk cells in the Drosophila trachea.

Deanne Francis, Amin S Ghabrial

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Vacuolar ATPase regulates ureteric bud branching morphogenesis during kidney development.American journal of physiology. Regulatory, integrative and comparative physiology · 2026
    Article
  2. Article
  3. Article
  4. Regulation of Archease by the mTOR-vATPase axis.Development (Cambridge, England) · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Time to make the doughnuts: Building and shaping seamless tubes.Seminars in cell & developmental biology · 2017
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Deanne FrancisDepartment of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Amin S GhabrialDepartment of Cell and Developmental Biology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA ghabrial@mail.med.upenn.edu.
University of Pennsylvania · US

Funding

TRAINING PROGRAM IN DEVELOPMENTAL BIOLOGYT32HD007516 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI RAPER, JONATHAN A · 1998 to 2012
$5.6M
Competition and morphogenesis in tip cell-mediated branching of tubular networksR01GM089782 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GHABRIAL, AMIN S · 2010 to 2022
$4.2M
NICHD NIH HHS T32 HD007516NICHD NIH HHS T32HD007516NIGMS NIH HHS 1R01GM089782NIGMS NIH HHS R01 GM089782
6 · The paper itself

Abstract

Tubes are essential for nutrient transport and gas exchange in multicellular eukaryotes, but how connections between different tube types are maintained over time is unknown. In the Drosophila tracheal system, mutations in oak gall (okg) and conjoined (cnj) confer identical defects, including late onset blockage near the terminal cell-stalk cell junction and the ectopic extension of autocellular, seamed tubes into the terminal cell. We determined that okg and cnj encode the E and G subunits of the vacuolar ATPase (vATPase) and showed that both the V0 and V1 domains are required for terminal cell morphogenesis. Remarkably, the ectopic seamed tubes running along vATPase-deficient terminal cells belonged to the neighboring stalk cells. All vATPase-deficient tracheal cells had reduced apical domains and terminal cells displayed mislocalized apical proteins. Consistent with recent reports that the mTOR and vATPase pathways intersect, we found that mTOR pathway mutants phenocopied okg and cnj. Furthermore, terminal cells depleted for the apical determinants Par6 or aPKC had identical ectopic seamed tube defects. We thus identify a novel mechanism of compensatory branching in which stalk cells extend autocellular tubes into neighboring terminal cells with undersized apical domains. This compensatory branching also occurs in response to injury, with damaged terminal cells being rapidly invaded by their stalk cell neighbor.

Indexed as

MorphogenesisAdherens JunctionsAnimalsCell PolarityDrosophila melanogasterDrosophila ProteinsHoloenzymesIntracellular SpaceMutationProtein SubunitsProton PumpsProton-Translocating ATPasesSignal TransductionTracheaVacuolesDrosophila ProteinsHoloenzymesProtein SubunitsProton PumpsProton-Translocating ATPasesApical polarityDrosophilaTorTubulogenesisvATPase

Identifiers

PMID25977367
PMCPMC4460740
OpenAlexW2188260800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.