Evidence map›Paper›PMID 25976599›Full record

ArticleBMC plant biology2015

Enhanced somatic embryogenesis in Theobroma cacao using the homologous BABY BOOM transcription factor.

Sergio L Florez, Rachel L Erwin, Siela N Maximova, Mark J Guiltinan, Wayne R Curtis

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
38.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 186 citations in OpenAlex.

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  10. Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2024
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  18. Advances in Somatic Embryogenesis of Banana.International journal of molecular sciences · 2023
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  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sergio L FlorezDepartment of Chemical Engineering, The Pennsylvania State University, University Park, PA, 16802, USA. Sergio.florez@curtislab.org.
Rachel L ErwinDepartment of Chemical Engineering, The Pennsylvania State University, University Park, PA, 16802, USA. Rachel.erwin@curtislab.org.
Siela N MaximovaDepartment of Plant Science and Huck Institute of Life Sciences, The Pennsylvania State University, University Park, PA, 16802, USA. snm104@psu.edu.
Mark J GuiltinanDepartment of Plant Science and Huck Institute of Life Sciences, The Pennsylvania State University, University Park, PA, 16802, USA. mjg9@psu.edu.
Wayne R CurtisDepartment of Chemical Engineering, The Pennsylvania State University, University Park, PA, 16802, USA. wrc2@psu.edu.
Pennsylvania State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTheobroma cacao, the chocolate tree, is an important economic crop in East Africa, South East Asia, and South and Central America. Propagation of elite varieties has been achieved through somatic embryogenesis (SE) but low efficiencies and genotype dependence still presents a significant limitation for its propagation at commercial scales. Manipulation of transcription factors has been used to enhance the formation of SEs in several other plant species. This work describes the use of the transcription factor Baby Boom (BBM) to promote the transition of somatic cacao cells from the vegetative to embryonic state.

resultsAn ortholog of the Arabidopsis thaliana BBM gene (AtBBM) was characterized in T. cacao (TcBBM). TcBBM expression was observed throughout embryo development and was expressed at higher levels during SE as compared to zygotic embryogenesis (ZE). TcBBM overexpression in A. thaliana and T. cacao led to phenotypes associated with SE that did not require exogenous hormones. While transient ectopic expression of TcBBM provided only moderate enhancements in embryogenic potential, constitutive overexpression dramatically increased SE proliferation but also appeared to inhibit subsequent development.

conclusionOur work provides validation that TcBBM is an ortholog to AtBBM and has a specific role in both somatic and zygotic embryogenesis. Furthermore, our studies revealed that TcBBM transcript levels could serve as a biomarker for embryogenesis in cacao tissue. Results from transient expression of TcBBM provide confirmation that transcription factors can be used to enhance SE without compromising plant development and avoiding GMO plant production. This strategy could compliment a hormone-based method of reprogramming somatic cells and lead to more precise manipulation of SE at the regulatory level of transcription factors. The technology would benefit the propagation of elite varieties with low regeneration potential as well as the production of transgenic plants, which similarly requires somatic cell reprogramming.

Indexed as

Sequence Homology, Amino AcidAmino Acid SequenceArabidopsisCacaoCotyledonGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantMolecular Sequence DataPhylogenyPlant Growth RegulatorsPlant ProteinsPlants, Genetically ModifiedPlant Somatic Embryogenesis TechniquesSeedsTranscription FactorsPlant Growth RegulatorsPlant ProteinsTranscription Factors

Identifiers

PMID25976599
PMCPMC4449528
OpenAlexW1887277504

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.