Evidence map›Paper›PMID 25976310›Full record

ArticleHuman molecular genetics2015

Lack of aprataxin impairs mitochondrial functions via downregulation of the APE1/NRF1/NRF2 pathway.

Beatriz Garcia-Diaz, Emanuele Barca, Andrea Balreira, Luis C Lopez, Saba Tadesse, Sindhu Krishna, Ali Naini, Caterina Mariotti, Barbara Castellotti, Catarina M Quinzii

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Beatriz Garcia-DiazDepartment of Neurology.
Emanuele BarcaDepartment of Neurology, UOC of Neurology and Neuromuscular Disorders, Department of Neuroscience, University of Messina, Messina 98100, Italy.
Andrea BalreiraDepartment of Neurology.
Luis C LopezDepartment of Neurology, Institute of Biotechnology, Biomedical Research Center (CIBM), Health Science Technological Park (PTS), University of Granada, Armilla, Granada 18100, Spain and.
Saba TadesseDepartment of Neurology.
Sindhu KrishnaDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA.
Ali NainiDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY 10032, USA.
Caterina MariottiUnitâ di Genetica delle Malattie Neurodegenerative e Metaboliche, Fondazione IRCCS Istituto Neurologico 'Carlo Besta', Milan 20126, Italy.
Barbara CastellottiUnitâ di Genetica delle Malattie Neurodegenerative e Metaboliche, Fondazione IRCCS Istituto Neurologico 'Carlo Besta', Milan 20126, Italy.
Catarina M QuinziiDepartment of Neurology, cmq2101@cumc.columbia.edu.
Columbia University Irving Medical Center · USFondazione IRCCS Istituto Neurologico Carlo Besta · ITUniversidad de Granada · ESUniversity of Messina · IT

Funding

Tech-CoreP01HD080642 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUINZII, CATARINA M. · 2014 to 2018
$7.8M
Investigating the pathogenesis of CoQ10 deficienciesK23HD065871 · NICHD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUINZII, CATARINA M. · 2010 to 2014
$552k
NICHD NIH HHS 5K23 HD065871NICHD NIH HHS NIH P01 HD080642-01
6 · The paper itself

Abstract

Ataxia oculomotor apraxia type 1 (AOA1) is an autosomal recessive disease caused by mutations in APTX, which encodes the DNA strand-break repair protein aprataxin (APTX). CoQ10 deficiency has been identified in fibroblasts and muscle of AOA1 patients carrying the common W279X mutation, and aprataxin has been localized to mitochondria in neuroblastoma cells, where it enhances preservation of mitochondrial function. In this study, we show that aprataxin deficiency impairs mitochondrial function, independent of its role in mitochondrial DNA repair. The bioenergetics defect in AOA1-mutant fibroblasts and APTX-depleted Hela cells is caused by decreased expression of SDHA and genes encoding CoQ biosynthetic enzymes, in association with reductions of APE1, NRF1 and NRF2. The biochemical and molecular abnormalities in APTX-depleted cells are recapitulated by knockdown of APE1 in Hela cells and are rescued by overexpression of NRF1/2. Importantly, pharmacological upregulation of NRF1 alone by 5-aminoimidazone-4-carboxamide ribonucleotide does not rescue the phenotype, which, in contrast, is reversed by the upregulation of NRF2 by rosiglitazone. Accordingly, we propose that the lack of aprataxin causes reduction of the pathway APE1/NRF1/NRF2 and their target genes. Our findings demonstrate a critical role of APTX in transcription regulation of mitochondrial function and the pathogenesis of AOA1 via a novel pathomechanistic pathway, which may be relevant to other neurodegenerative diseases.

Indexed as

Down-RegulationSignal TransductionAtaxiaDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsFemaleFibroblastsGenetic Diseases, InbornHumansMaleMitochondriaNF-E2-Related Factor 2Nuclear ProteinsNuclear Respiratory Factor 1APEX1 protein, humanAPTX protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsNFE2L2 protein, humanNF-E2-Related Factor 2NRF1 protein, humanNuclear ProteinsNuclear Respiratory Factor 1

Identifiers

PMID25976310
PMCPMC4512623
OpenAlexW1879099770

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.