Evidence map›Paper›PMID 25974127›Full record

ArticlePlant biotechnology journal2016

Compact tomato seedlings and plants upon overexpression of a tomato chromatin remodelling ATPase gene.

Adam Folta, Joachim W Bargsten, Ton Bisseling, Jan-Peter Nap, Ludmila Mlynarova

Open access · bronzeAbstract read
In one paragraph

Article in Plant biotechnology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Frontiers in plant science · 2022
    Article
  3. Article
  4. Article
  5. Genetic dissection of plant growth habit in chickpea.Functional & integrative genomics · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Adam FoltaLaboratory of Molecular Biology, Plant Sciences Group, Wageningen University and Research Centre, Wageningen, The Netherlands.
Joachim W BargstenApplied Bioinformatics, Bioscience, Plant Research International, Plant Sciences Group, Wageningen University and Research Centre, Wageningen, The Netherlands.
Ton BisselingLaboratory of Molecular Biology, Plant Sciences Group, Wageningen University and Research Centre, Wageningen, The Netherlands.
Jan-Peter NapApplied Bioinformatics, Bioscience, Plant Research International, Plant Sciences Group, Wageningen University and Research Centre, Wageningen, The Netherlands.
Ludmila MlynarovaLaboratory of Molecular Biology, Plant Sciences Group, Wageningen University and Research Centre, Wageningen, The Netherlands.
Graduate School Experimental Plant Sciences · NLCentre for BioSystems Genomics · NLHanze University of Applied Sciences · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Control of plant growth is an important aspect of crop productivity and yield in agriculture. Overexpression of the AtCHR12/23 genes in Arabidopsis thaliana reduced growth habit without other morphological changes. These two genes encode Snf2 chromatin remodelling ATPases. Here, we translate this approach to the horticultural crop tomato (Solanum lycopersicum). We identified and cloned the single tomato ortholog of the two Arabidopsis Snf2 genes, designated SlCHR1. Transgenic tomato plants (cv. Micro-Tom) that constitutively overexpress the coding sequence of SlCHR1 show reduced growth in all developmental stages of tomato. This confirms that SlCHR1 combines the functions of both Arabidopsis genes in tomato. Compared to the wild type, the transgenic seedlings of tomato have significantly shorter roots, hypocotyls and reduced cotyledon size. Transgenic plants have a much more compact growth habit with markedly reduced plant height, severely compacted reproductive structures with smaller flowers and smaller fruits. The results indicate that either GMO-based or non-GMO-based approaches to modulate the expression of chromatin remodelling ATPase genes could develop into methods to control plant growth, for example to replace the use of chemical growth retardants. This approach is likely to be applicable and attractive for any crop for which growth habit reduction has added value.

Indexed as

Genes, PlantAdenosine TriphosphatasesArabidopsisChromatin Assembly and DisassemblyFlowersFruitOpen Reading FramesPlant ProteinsPlants, Genetically ModifiedSeedlingsSolanum lycopersicumStress, PhysiologicalAdenosine TriphosphatasesPlant Proteinschromatin remodellinggrowthplant habitSWI/SNF2tomato

Identifiers

PMID25974127
PMCPMC11388966
OpenAlexW2121033475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.