Evidence map›Paper›PMID 25973277›Full record

ArticleInternational journal of breast cancer2015

SEMA6D Expression and Patient Survival in Breast Invasive Carcinoma.

Dongquan Chen, Yufeng Li, Lizhong Wang, Kai Jiao

Open access · goldAbstract read
In one paragraph

Article in International journal of breast cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dongquan ChenDivision of Preventive Medicine, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA ; Comprehensive Cancer Center, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Yufeng LiDivision of Preventive Medicine, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA ; Comprehensive Cancer Center, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Lizhong WangComprehensive Cancer Center, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA ; Research Division, Department of Genetics, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Kai JiaoResearch Division, Department of Genetics, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
University of Alabama at Birmingham · US

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Robert S Welner · 1985 to 2026
$165.9M
The Roles of Semaphorin Signaling During Valvuloseptal DevelopmentR01HL095783 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI JIAO, KAI · 2010 to 2021
$3.4M
MicroRNAs for monitoring tumor progression and predicting response to therapyR21CA179282 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WANG, LIZHONG · 2014 to 2015
$352k
Roles of Semaphorin Signaling in Breast Cancer Racial DisparitiesR21CA199586 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI JIAO, KAI, WANG, LIZHONG · 2015 to 2016
$352k
NCI NIH HHS P30 CA013148NCI NIH HHS R21 CA179282NCI NIH HHS R21 CA199586NHLBI NIH HHS R01 HL095783
6 · The paper itself

Abstract

Breast cancer (BC) is the second most common cancer diagnosed in American women and is also the second leading cause of cancer death in women. Research has focused heavily on BC metastasis. Multiple signaling pathways have been implicated in regulating BC metastasis. Our knowledge of regulation of BC metastasis is, however, far from complete. Identification of new factors during metastasis is an essential step towards future therapy. Our labs have focused on Semaphorin 6D (SEMA6D), which was implicated in immune responses, heart development, and neurogenesis. It will be interesting to know SEMA6D-related genomic expression profile and its implications in clinical outcome. In this study, we examined the public datasets of breast invasive carcinoma from The Cancer Genome Atlas (TCGA). We analyzed the expression of SEMA6D along with its related genes, their functions, pathways, and potential as copredictors for BC patients' survival. We found 6-gene expression profile that can be used as such predictors. Our study provides evidences for the first time that breast invasive carcinoma may contain a subtype based on SEMA6D expression. The expression of SEMA6D gene may play an important role in promoting patient survival, especially among triple negative breast cancer patients.

Identifiers

PMID25973277
PMCPMC4417987
OpenAlexW2087990211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.