Evidence map›Paper›PMID 25972859›Full record

ArticleFrontiers in microbiology2015

Genomes of sequence type 121 Listeria monocytogenes strains harbor highly conserved plasmids and prophages.

Stephan Schmitz-Esser, Anneliese Müller, Beatrix Stessl, Martin Wagner

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 104 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Modeling the Growth ofFood science & nutrition · 2025
    Article
  5. Population structure and gene flux ofMicrobial genomics · 2025
    Article
  6. Birmingham-group IncP-1Microbial genomics · 2025
    Article
  7. Investigating the role of theFEMS microbes · 2025
    Article
  8. Article
  9. Surveillance and genetic characterization ofFrontiers in microbiology · 2024
    Article
  10. Article
  11. Closed genome sequences of twoMicrobiology resource announcements · 2023
    Article
  12. Foods (Basel, Switzerland) · 2023
    Review
  13. Article
  14. Characterization and Antibiotic Resistance ofFoods (Basel, Switzerland) · 2023
    Article
  15. Genomic and pathogenicity islands ofFrontiers in molecular biosciences · 2023
    Review
  16. Article
  17. Genome-Wide Association Study ofMicroorganisms · 2022
    Article
  18. Food science & nutrition · 2022
    Review
  19. Persistence ofFoods (Basel, Switzerland) · 2022
    Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Stephan Schmitz-EsserDepartment for Farm Animals and Veterinary Public Health, Institute for Milk Hygiene, University of Veterinary Medicine Vienna Vienna, Austria.
Anneliese MüllerDepartment for Farm Animals and Veterinary Public Health, Institute for Milk Hygiene, University of Veterinary Medicine Vienna Vienna, Austria.
Beatrix StesslDepartment for Farm Animals and Veterinary Public Health, Institute for Milk Hygiene, University of Veterinary Medicine Vienna Vienna, Austria.
Martin WagnerDepartment for Farm Animals and Veterinary Public Health, Institute for Milk Hygiene, University of Veterinary Medicine Vienna Vienna, Austria.
University of Veterinary Medicine Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The food-borne pathogen Listeria (L.) monocytogenes is often found in food production environments. Thus, controlling the occurrence of L. monocytogenes in food production is a great challenge for food safety. Among a great diversity of L. monocytogenes strains from food production, particularly strains belonging to sequence type (ST)121 are prevalent. The molecular reasons for the abundance of ST121 strains are however currently unknown. We therefore determined the genome sequences of three L. monocytogenes ST121 strains: 6179 and 4423, which persisted for up to 8 years in food production plants in Ireland and Austria, and of the strain 3253 and compared them with available L. monocytogenes ST121 genomes. Our results show that the ST121 genomes are highly similar to each other and show a tremendously high degree of conservation among some of their prophages and particularly among their plasmids. This remarkably high level of conservation among prophages and plasmids suggests that strong selective pressure is acting on them. We thus hypothesize that plasmids and prophages are providing important adaptations for survival in food production environments. In addition, the ST121 genomes share common adaptations which might be related to their persistence in food production environments such as the presence of Tn6188, a transposon responsible for increased tolerance against quaternary ammonium compounds, a yet undescribed insertion harboring recombination hotspot (RHS) repeat proteins, which are most likely involved in competition against other bacteria, and presence of homologs of the L. innocua genes lin0464 and lin0465.

Indexed as

genomeListeria monocytogenespersistenceplasmidprophagesequence type 121

Identifiers

PMID25972859
PMCPMC4412001
OpenAlexW2075307840

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.