Evidence map›Paper›PMID 25972035›Full record

ArticleJournal of human genetics2015

Association of common variants in the calcium-sensing receptor gene with serum calcium levels in East Asians.

Nadimuthu Vinayagamoorthy, Seon-Hee Yim, Seung-Hyun Jung, Sung-Won Park, Young Jin Kim, Bong-Jo Kim, Yeun-Jun Chung

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In one paragraph

Article in Journal of human genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Nadimuthu VinayagamoorthyIntegrated Research Center for Genome Polymorphism, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Seon-Hee YimDepartment of Medical Education, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Seung-Hyun JungIntegrated Research Center for Genome Polymorphism, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Sung-Won ParkIntegrated Research Center for Genome Polymorphism, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Young Jin KimCenter for Genome Science, National Institute of Health, Osong Health Technology Administration Complex, Chungcheongbuk-do, Korea.
Bong-Jo KimCenter for Genome Science, National Institute of Health, Osong Health Technology Administration Complex, Chungcheongbuk-do, Korea.
Yeun-Jun ChungIntegrated Research Center for Genome Polymorphism, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Catholic University of Korea · KRKorea National Institute of Health · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium is a universal intracellular messenger that has an important role in controlling various cellular processes. In this study, we explored genetic polymorphisms to identify novel loci influencing serum calcium levels in East Asians through a two-stage genome-wide association study with the sample of 8642 unrelated Koreans (4558 for discovery and 4093 for replication). Using single-nucleotide polymorphism (SNP) arrays, we discovered 963 associated SNPs in stage 1, and replicated 105 SNPs among them in stage 2. We examined them in a combined set of stage 1 and 2 samples and observed that 65 SNPs were significantly associated with serum calcium levels. Among them, rs13068893 in the CASR gene showed the strongest significance (P=3.85 × 10(-8)). Considering the high allele frequency and significance level of the rs13068893C>G in the CASR gene, this SNP may have a key role in regulating the serum calcium level. We also successfully replicated the four loci (CASR, CSTA, DGKD and GCKR) using our data set that have been previously reported to be significantly associated with calcium levels in Europeans and Indians. Further studies with more East Asian subjects or meta-analyses on them may enable validation of our results and identification of novel genetic loci associated with serum calcium levels.

Indexed as

Asian PeoplePolymorphism, Single NucleotideAdultAgedAsia, EasternCalciumFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleMiddle AgedReceptors, Calcium-SensingCalciumCASR protein, humanReceptors, Calcium-Sensing

Identifiers

PMID25972035
OpenAlexW1600956963

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.