Evidence map›Paper›PMID 25971974›Full record

ArticleThe Journal of biological chemistry2015

The tRNA Splicing Endonuclease Complex Cleaves the Mitochondria-localized CBP1 mRNA.

Tatsuhisa Tsuboi, Reina Yamazaki, Risa Nobuta, Ken Ikeuchi, Shiho Makino, Ayumi Ohtaki, Yutaka Suzuki, Tohru Yoshihisa, Christopher Trotta, Toshifumi Inada

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. The highly conserved intron of tyrosine tRNA is critical forProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Review
  4. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  5. Article
  6. Review
  7. Article
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  9. Article
  10. Comparative parallel analysis of RNA ends identifies mRNA substrates of a tRNA splicing endonuclease-initiated mRNA decay pathway.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
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  13. Article
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Tatsuhisa TsuboiFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Reina YamazakiFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Risa NobutaFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Ken IkeuchiFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Shiho MakinoFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Ayumi OhtakiFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan.
Yutaka Suzukithe Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan.
Tohru Yoshihisathe Graduate School of Life Science, University of Hyogo, Hyogo 678-1297, Japan, and.
Christopher Trottathe PTC Therapeutics, South Plainfield, New Jersey 07080.
Toshifumi InadaFrom the Graduate School of Pharmaceutical Science, Tohoku University, Aoba-ku, Sendai 980-8578, Japan, tinada@m.tohoku.ac.jp.
Tohoku University · JPPTC Therapeutics (United States) · USThe University of Tokyo · JPUniversity of Hyogo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tRNA splicing endonuclease (Sen) complex is located on the mitochondrial outer membrane and splices precursor tRNAs in Saccharomyces cerevisiae. Here, we demonstrate that the Sen complex cleaves the mitochondria-localized mRNA encoding Cbp1 (cytochrome b mRNA processing 1). Endonucleolytic cleavage of this mRNA required two cis-elements: the mitochondrial targeting signal and the stem-loop 652-726-nt region. Mitochondrial localization of the Sen complex was required for cleavage of the CBP1 mRNA, and the Sen complex cleaved this mRNA directly in vitro. We propose that the Sen complex cleaves the CBP1 mRNA, which is co-translationally localized to mitochondria via its mitochondrial targeting signal.

Indexed as

Base SequenceEndoribonucleasesMitochondriaMitochondrial ProteinsMolecular Sequence DataNucleic Acid ConformationRNA-Binding ProteinsRNA, MessengerRNA SplicingSaccharomyces cerevisiaeSaccharomyces cerevisiae Proteinscbp1 protein, S cerevisiaeEndoribonucleasesMitochondrial ProteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiae Proteinssplicing endonucleaseendonucleasemitochondriamRNA decaymRNA decay, endonucleasemRNA localizationquality controltransfer RNA (tRNA)translationtRNA splicing

Identifiers

PMID25971974
PMCPMC4481206
OpenAlexW1487850295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.