Evidence map›Paper›PMID 25971550›Full record

ArticlePlant physiology2015

The Petunia GRAS Transcription Factor ATA/RAM1 Regulates Symbiotic Gene Expression and Fungal Morphogenesis in Arbuscular Mycorrhiza.

Mélanie K Rich, Martine Schorderet, Laure Bapaume, Laurent Falquet, Patrice Morel, Michiel Vandenbussche, Didier Reinhardt

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
12.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
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  5. TheFrontiers in microbiology · 2024
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  8. Review
  9. Review
  10. Molecular Regulation of Arbuscular Mycorrhizal Symbiosis.International journal of molecular sciences · 2022
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Constitutive Overexpression ofPlant physiology · 2020
    Article
  17. Article
  18. Mechanisms and Impact of Symbiotic Phosphate Acquisition.Cold Spring Harbor perspectives in biology · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Mélanie K RichDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.).
Martine SchorderetDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.).ORCID http://orcid.org/0000-0002-6323-1979
Laure BapaumeDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.).ORCID http://orcid.org/0000-0002-6681-7086
Laurent FalquetDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.).ORCID http://orcid.org/0000-0001-8102-7579
Patrice MorelDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.).ORCID http://orcid.org/0000-0003-1690-8032
Michiel VandenbusscheDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.).ORCID http://orcid.org/0000-0002-4192-7369
Didier ReinhardtDepartment of Biology (M.K.R., M.S., L.B., L.F., D.R.), and Swiss Institute of Bioinformatics (L.F.), University of Fribourg, CH-1700 Fribourg, Switzerland; andDepartment of Reproduction and Plant Development, Centre National de la Recherche Scientifique/Institut National de la Recherche Agronomique/Ecole Normal Supérieure de Lyon, F-69364 Lyon Cedex 07, France (P.M., M.V.) didier.reinhardt@unifr.ch.ORCID http://orcid.org/0000-0003-3495-6783
University of Fribourg · CHSIB Swiss Institute of Bioinformatics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arbuscular mycorrhiza (AM) is a mutual symbiosis that involves a complex symbiotic interface over which nutrients are exchanged between the plant host and the AM fungus. Dozens of genes in the host are required for the establishment and functioning of the interaction, among them nutrient transporters that mediate the uptake of mineral nutrients delivered by the fungal arbuscules. We have isolated in a genetic mutant screen a petunia (Petunia hybrida) Gibberellic Acid Insensitive, Repressor of Gibberellic Acid Insensitive, and Scarecrow (GRAS)-type transcription factor, Atypical Arbuscule (ATA), that acts as the central regulator of AM-related genes and is required for the morphogenesis of arbuscules. Forced mycorrhizal inoculations from neighboring wild-type plants revealed an additional role of ATA in restricting mycorrhizal colonization of the root meristem. The lack of ATA, which represents the ortholog of Required For Arbuscular Mycorrhiza1 in Medicago truncatula, renders the interaction completely ineffective, hence demonstrating the central role of AM-related genes for arbuscule development and function.

Indexed as

Gene Expression Regulation, PlantColony Count, MicrobialGenes, PlantGenetic LociMedicago truncatulaMeristemMolecular Sequence DataMorphogenesisMutationMycorrhizaePetuniaPhenotypePlant ProteinsSymbiosisTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID25971550
PMCPMC4741351
OpenAlexW1532083738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.