Evidence map›Paper›PMID 25970776›Full record

ArticleOncotarget2015

Cytogenomic profiling of breast cancer brain metastases reveals potential for repurposing targeted therapeutics.

Aliccia Bollig-Fischer, Sharon K Michelhaugh, Priyanga Wijesinghe, Greg Dyson, Adele Kruger, Nallasivam Palanisamy, Lydia Choi, Baraa Alosh, Rouba Ali-Fehmi, Sandeep Mittal

Abstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Foe or friend? Janus-faces of the neurovascular unit in the formation of brain metastases.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2018
    Review
  10. Article
  11. Breast Cancer Brain Metastases: Clonal Evolution in Clinical Context.International journal of molecular sciences · 2017
    Review
  12. Review
  13. Article
  14. [Tumor Cells and Micro-environment in Brain Metastases].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2016
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Aliccia Bollig-FischerDepartment of Oncology, Wayne State University, Detroit, Michigan, USA.
Sharon K MichelhaughDepartment of Neurosurgery, Wayne State University, Detroit, Michigan, USA.
Priyanga WijesingheDepartment of Oncology, Wayne State University, Detroit, Michigan, USA.
Greg DysonDepartment of Oncology, Wayne State University, Detroit, Michigan, USA.
Adele KrugerDepartment of Obstetrics/Gynecology, Wayne State University, Detroit, Michigan, USA.
Nallasivam PalanisamyHenry Ford Health System, Detroit, Michigan, USA.
Lydia ChoiDepartment of Oncology, Wayne State University, Detroit, Michigan, USA.
Baraa AloshDepartment of Pathology, Wayne State University, Detroit, Michigan, USA.
Rouba Ali-FehmiDepartment of Pathology, Wayne State University, Detroit, Michigan, USA.
Sandeep MittalDepartment of Oncology, Wayne State University, Detroit, Michigan, USA.

Funding

Tumor Biology and Microenvironment (Program 1)P30CA022453 · NCI · WAYNE STATE UNIVERSITY · PI PAUL M STEMMER · 1985 to 2026
$68.4M
Enhancing neoadjuvant chemotherpay responses with targeted T cellsR01CA140314 · NCI · WAYNE STATE UNIVERSITY · PI BEPLER, GEROLD · 2010 to 2015
$2.5M
NCI NIH HHS P30 CA022453NCI NIH HHS R01 CA140314
6 · The paper itself

Abstract

Breast cancer brain metastases remain a significant clinical problem. Chemotherapy is ineffective and a lack of treatment options result in poor patient outcomes. Targeted therapeutics have proven to be highly effective in primary breast cancer, but lack of molecular genomic characterization of metastatic brain tumors is hindering the development of new treatment regimens. Here we contribute to fill this void by reporting on gene copy number variation (CNV) in 10 breast cancer metastatic brain tumors, assayed by array comparative genomic hybridization (aCGH). Results were compared to a list of cancer genes verified by others to influence cancer. Cancer gene aberrations were identified in all specimens and pathway-level analysis was applied to aggregate data, which identified stem cell pluripotency pathway enrichment and highlighted recurring, significant amplification of SOX2, PIK3CA, NTRK1, GNAS, CTNNB1, and FGFR1. For a subset of the metastatic brain tumor samples (n = 4) we compared patient-matched primary breast cancer specimens. The results of our CGH analysis and validation by alternative methods indicate that oncogenic signals driving growth of metastatic tumors exist in the original cancer. This report contributes support for more rapid development of new treatments of metastatic brain tumors, the use of genomic-based diagnostic tools and repurposed drug treatments.

Indexed as

AdultAgedBrain NeoplasmsBreast NeoplasmsDNA Copy Number VariationsFemaleGene AmplificationHumansMiddle AgedOncogenesbrain metastasesbreast cancercopy number variationoncogenestargeted therapy

Identifiers

PMID25970776
PMCPMC4546491

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.