Evidence map›Paper›PMID 25970771›Full record

ArticleOncotarget2015

Loss of the deubiquitylase BAP1 alters class I histone deacetylase expression and sensitivity of mesothelioma cells to HDAC inhibitors.

Joseph J Sacco, Jenna Kenyani, Zohra Butt, Rachel Carter, Hui Yi Chew, Liam P Cheeseman, Sarah Darling, Michael Denny, Sylvie Urbé, Michael J Clague and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 54 citations in OpenAlex.

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  6. An overview of BAP1 biological functions and current therapeutics.Biochimica et biophysica acta. Reviews on cancer · 2025
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  19. BAP1: Not just a BRCA1-associated protein.Cancer treatment reviews · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Joseph J SaccoCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Jenna KenyaniCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Zohra ButtCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Rachel CarterCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Hui Yi ChewCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Liam P CheesemanCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Sarah DarlingCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Michael DennyCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Sylvie UrbéCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Michael J ClagueCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
Judy M CoulsonCellular & Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, UK.
University of Liverpool · GBGenome Institute of Singapore · SGMRC Laboratory of Molecular Biology · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Histone deacetylases are important targets for cancer therapeutics, but their regulation is poorly understood. Our data show coordinated transcription of HDAC1 and HDAC2 in lung cancer cell lines, but suggest HDAC2 protein expression is cell-context specific. Through an unbiased siRNA screen we found that BRCA1-associated protein 1 (BAP1) regulates their expression, with HDAC2 reduced and HDAC1 increased in BAP1 depleted cells. BAP1 loss-of-function is increasingly reported in cancers including thoracic malignancies, with frequent mutation in malignant pleural mesothelioma. Endogenous HDAC2 directly correlates with BAP1 across a panel of lung cancer cell lines, and is downregulated in mesothelioma cell lines with genetic BAP1 inactivation. We find that BAP1 regulates HDAC2 by increasing transcript abundance, rather than opposing its ubiquitylation. Importantly, although total cellular HDAC activity is unaffected by transient depletion of HDAC2 or of BAP1 due to HDAC1 compensation, this isoenzyme imbalance sensitizes MSTO-211H cells to HDAC inhibitors. However, other established mesothelioma cell lines with low endogenous HDAC2 have adapted to become more resistant to HDAC inhibition. Our work establishes a mechanism by which BAP1 loss alters sensitivity of cancer cells to HDAC inhibitors. Assessment of BAP1 and HDAC expression may ultimately help identify patients likely to respond to HDAC inhibitors.

Indexed as

ApoptosisCell Line, TumorHistone Deacetylase 1Histone Deacetylase 2Histone Deacetylase InhibitorsHumansLung NeoplasmsMesotheliomaMesothelioma, MalignantTranscription, GeneticTumor Suppressor ProteinsUbiquitinationUbiquitin ThiolesteraseBAP1 protein, humanHDAC1 protein, humanHDAC2 protein, humanHistone Deacetylase 1Histone Deacetylase 2Histone Deacetylase InhibitorsTumor Suppressor ProteinsUbiquitin ThiolesteraseBRCA1-associated protein 1histone deacetylase 2MPMstratified medicinevorinostat

Identifiers

PMID25970771
PMCPMC4537048
OpenAlexW1961955832

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.