Evidence map›Paper›PMID 25969461›Full record

ArticleGenetics2015

MSH3 Promotes Dynamic Behavior of Trinucleotide Repeat Tracts In Vivo.

Gregory M Williams, Jennifer A Surtees

Abstract read
In one paragraph

Article in Genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Genomic Instability and Cancer Risk Associated with Erroneous DNA Repair.International journal of molecular sciences · 2021
    Review
  8. Review
  9. Article
  10. Alternative DNA StructuresMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  11. HDAC3 deacetylates the DNA mismatch repair factor MutSβ to stimulate triplet repeat expansions.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Break-induced replication links microsatellite expansion to complex genome rearrangements.BioEssays : news and reviews in molecular, cellular and developmental biology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Gregory M WilliamsDepartment of Biochemistry, School of Medicine and Biomedical Sciences, State University of New York at Buffalo, New York 14214.
Jennifer A SurteesDepartment of Biochemistry, School of Medicine and Biomedical Sciences, State University of New York at Buffalo, New York 14214 Genetics, Genomics and Bioinformatics Program, School of Medicine and Biomedical Sciences, State University of New York at Buffalo, New York 14214 jsurtees@buffalo.edu.ORCID http://orcid.org/0000-0003-4243-0933

Funding

Roles for Mismatch Repair Proteins in Maintaining Genome StabilityR01GM087459 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI SURTEES, JENNIFER ANNE · 2009 to 2013
$1.4M
NIGMS NIH HHS GM-087459NIGMS NIH HHS R01 GM087459
6 · The paper itself

Abstract

Trinucleotide repeat (TNR) expansions are the underlying cause of more than 40 neurodegenerative and neuromuscular diseases, including myotonic dystrophy and Huntington's disease, yet the pathway to expansion remains poorly understood. An important step in expansion is the shift from a stable TNR sequence to an unstable, expanding tract, which is thought to occur once a TNR attains a threshold length. Modeling of human data has indicated that TNR tracts are increasingly likely to expand as they increase in size and to do so in increments that are smaller than the repeat itself, but this has not been tested experimentally. Genetic work has implicated the mismatch repair factor MSH3 in promoting expansions. Using Saccharomyces cerevisiae as a model for CAG and CTG tract dynamics, we examined individual threshold-length TNR tracts in vivo over time in MSH3 and msh3Δ backgrounds. We demonstrate, for the first time, that these TNR tracts are highly dynamic. Furthermore, we establish that once such a tract has expanded by even a few repeat units, it is significantly more likely to expand again. Finally, we show that threshold- length TNR sequences readily accumulate net incremental expansions over time through a series of small expansion and contraction events. Importantly, the tracts were substantially stabilized in the msh3Δ background, with a bias toward contractions, indicating that Msh2-Msh3 plays an important role in shifting the expansion-contraction equilibrium toward expansion in the early stages of TNR tract expansion.

Indexed as

Trinucleotide Repeat ExpansionDNA-Binding ProteinsDNA Mismatch RepairMutS Homolog 3 ProteinSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA-Binding ProteinsMSH3 protein, S cerevisiaeMutS Homolog 3 ProteinSaccharomyces cerevisiae Proteinsmismatch repairMsh2-Msh3Saccharomyces cerevisiaetrinucleotide repeat tract

Identifiers

PMID25969461
PMCPMC4512540

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.