Evidence map›Paper›PMID 25968887›Full record

ArticleCancer research2015

KRAS Genomic Status Predicts the Sensitivity of Ovarian Cancer Cells to Decitabine.

Michelle L Stewart, Pablo Tamayo, Andrew J Wilson, Stephanie Wang, Yun Min Chang, Jong W Kim, Dineo Khabele, Alykhan F Shamji, Stuart L Schreiber

Abstract read
In one paragraph

Article in Cancer research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Mechanisms of Cell Death Induced by Erastin in Human Ovarian Tumor Cells.International journal of molecular sciences · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Targeting epigenetic regulators to overcome drug resistance in cancers.Signal transduction and targeted therapy · 2023
    Review
  14. Review
  15. Article
  16. KITMolecular cancer therapeutics · 2021
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Michelle L StewartThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Pablo TamayoThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Andrew J WilsonDepartment of Obstetrics and Gynecology, Vanderbilt University, Nashville, Tennessee.
Stephanie WangThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Yun Min ChangThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Jong W KimThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Dineo KhabeleDepartment of Obstetrics and Gynecology, Vanderbilt University, Nashville, Tennessee.
Alykhan F ShamjiThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Stuart L SchreiberThe Broad Institute of Harvard and MIT, Cambridge, Massachusetts. stuart_schreiber@harvard.edu.
Broad Institute · USVanderbilt University · US

Funding

Supporting Integrative Genomic Analysis Users with GenePatternR01GM074024 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MESIROV, JILL P. · 2005 to 2019
$6.6M
Knowledge-based Gene Expression Analysis for Biomedical and Cancer ResearchR01CA121941 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MESIROV, JILL P. · 2006 to 2016
$5.1M
Cancer dependencies associated with genomic alterations and targeted by small molU01CA176152 · NCI · BROAD INSTITUTE, INC. · PI SCHREIBER, STUART L · 2013 to 2016
$4.4M
Targeting Histone Deacetylases with Small Moleule Inhibitors in Ovarian CancerK08CA148887 · NCI · VANDERBILT UNIVERSITY · PI KHABELE, DINEO · 2010 to 2014
$795k
NCI NIH HHS K08 CA148887NCI NIH HHS K08CA148887NCI NIH HHS R01 CA121941NCI NIH HHS U01 CA176152NCI NIH HHS U01CA176152NIGMS NIH HHS R01 GM074024
6 · The paper itself

Abstract

Decitabine, a cancer therapeutic that inhibits DNA methylation, produces variable antitumor response rates in patients with solid tumors that might be leveraged clinically with identification of a predictive biomarker. In this study, we profiled the response of human ovarian, melanoma, and breast cancer cells treated with decitabine, finding that RAS/MEK/ERK pathway activation and DNMT1 expression correlated with cytotoxic activity. Further, we showed that KRAS genomic status predicted decitabine sensitivity in low-grade and high-grade serous ovarian cancer cells. Pretreatment with decitabine decreased the cytotoxic activity of MEK inhibitors in KRAS-mutant ovarian cancer cells, with reciprocal downregulation of DNMT1 and MEK/ERK phosphorylation. In parallel with these responses, decitabine also upregulated the proapoptotic BCL-2 family member BNIP3, which is known to be regulated by MEK and ERK, and heightened the activity of proapoptotic small-molecule navitoclax, a BCL-2 family inhibitor. In a xenograft model of KRAS-mutant ovarian cancer, combining decitabine and navitoclax heightened antitumor activity beyond administration of either compound alone. Our results define the RAS/MEK/DNMT1 pathway as a determinant of sensitivity to DNA methyltransferase inhibition, specifically implicating KRAS status as a biomarker of drug response in ovarian cancer.

Indexed as

Genes, rasMutationAnimalsAzacitidineBiomarkers, TumorCystadenocarcinoma, SerousDecitabineDrug Resistance, NeoplasmFemaleHumansMiceMice, NudeMice, TransgenicOvarian NeoplasmsPrognosisTumor Cells, CulturedAzacitidineBiomarkers, TumorDecitabine

Identifiers

PMID25968887
PMCPMC4506246
OpenAlexW1947868937

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.