Evidence map›Paper›PMID 25968647›Full record

ArticlemBio2015

Alginate Polymerization and Modification Are Linked in Pseudomonas aeruginosa.

M Fata Moradali, Ivan Donati, Ian M Sims, Shirin Ghods, Bernd H A Rehm

Open access · goldAbstract read
In one paragraph

Article in mBio, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 91 citations in OpenAlex.

  1. Review
  2. Microbiology (Reading, England) · 2026
    Article
  3. Discovery of Novel c-di-GMP-Related Genes inPathogens (Basel, Switzerland) · 2026
    Article
  4. Review
  5. Applying a polysaccharide lyase fromApplied and environmental microbiology · 2025
    Article
  6. Advances in alginate biosynthesis: regulation and production inFrontiers in bioengineering and biotechnology · 2025
    Review
  7. Article
  8. Tracking of Bacteriophage Predation onSensors (Basel, Switzerland) · 2024
    Article
  9. Review
  10. Review
  11. Optimization of the Green Extraction of Red Araçá (Molecules (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Alginate: Enhancement Strategies for Advanced Applications.International journal of molecular sciences · 2022
    Review
  18. Review
  19. Article
  20. Genetic Regulation of Alginate Production inFrontiers in microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

M Fata MoradaliInstitute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Ivan DonatiDepartment of Life Sciences, University of Trieste, Trieste, Italy.
Ian M SimsThe Ferrier Research Institute, Victoria University of Wellington, Lower Hutt, Wellington, New Zealand.
Shirin GhodsInstitute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Bernd H A RehmB.Rehm@massey.ac.nz.
Massey University · NZMacDiarmid Institute for Advanced Materials and Nanotechnology · NZUniversity of Trieste · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledThe molecular mechanisms of alginate polymerization/modification/secretion by a proposed envelope-spanning multiprotein complex are unknown. Here, bacterial two-hybrid assays and pulldown experiments showed that the catalytic subunit Alg8 directly interacts with the proposed copolymerase Alg44 while embedded in the cytoplasmic membrane. Alg44 additionally interacts with the lipoprotein AlgK bridging the periplasmic space. Site-specific mutagenesis of Alg44 showed that protein-protein interactions and stability were independent of conserved amino acid residues R17 and R21, which are involved in c-di-GMP binding, the N-terminal PilZ domain, and the C-terminal 26 amino acids. Site-specific mutagenesis was employed to investigate the c-di-GMP-mediated activation of alginate polymerization by the PilZAlg44 domain and Alg8. Activation was found to be different from the proposed activation mechanism for cellulose synthesis. The interactive role of Alg8, Alg44, AlgG (epimerase), and AlgX (acetyltransferase) on alginate polymerization and modification was studied by using site-specific deletion mutants, inactive variants, and overproduction of subunits. The compositions, molecular masses, and material properties of resulting novel alginates were analyzed. The molecular mass was reduced by epimerization, while it was increased by acetylation. Interestingly, when overproduced, Alg44, AlgG, and the nonepimerizing variant AlgG(D324A) increased the degree of acetylation, while epimerization was enhanced by AlgX and its nonacetylating variant AlgX(S269A). Biofilm architecture analysis showed that acetyl groups promoted cell aggregation while nonacetylated polymannuronate alginate promoted stigmergy. Overall, this study sheds new light on the arrangement of the multiprotein complex involved in alginate production. Furthermore, the activation mechanism and the interplay between polymerization and modification of alginate were elucidated. IMPORTANCE: This study provides new insights into the molecular mechanisms of the synthesis of the unique polysaccharide, alginate, which not only is an important virulence factor of the opportunistic human pathogen Pseudomonas aeruginosa but also has, due to its material properties, many applications in medicine and industry. Unraveling the assembly and composition of the alginate-synthesizing and envelope-spanning multiprotein complex will be of tremendous significance for the scientific community. We identified a protein-protein interaction network inside the multiprotein complex and studied its relevance with respect to alginate polymerization/modification as well as the c-di-GMP-mediated activation mechanism. A relationship between alginate polymerization and modification was shown. Due to the role of alginate in pathogenesis as well as its unique material properties harnessed in numerous applications, results obtained in this study will aid the design and development of inhibitory drugs as well as the commercial bacterial production of tailor-made alginates.

Indexed as

AcetylationAcetyltransferasesAlginatesBacterial ProteinsBiofilmsCelluloseCyclic GMPHumansMembrane ProteinsMultiprotein ComplexesMutagenesis, Site-DirectedMutationPolymerizationPseudomonas aeruginosaRacemases and EpimerasesTwo-Hybrid System TechniquesAcetyltransferasesAlg44 protein, Pseudomonas aeruginosaAlg8 protein, Pseudomonas aeruginosaAlginatesAlgK protein, Pseudomonas aeruginosaBacterial Proteinsbis(3',5')-cyclic diguanylic acidCelluloseCyclic GMPMembrane ProteinsMultiprotein ComplexesRacemases and EpimerasesVirulence Factors

Identifiers

PMID25968647
PMCPMC4436075
OpenAlexW2149274187

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.