Evidence map›Paper›PMID 25968128›Full record

ArticleBMC nephrology2015

Pathogenic pathways are activated in each major cell type of the glomerulus in the Cd2ap mutant mouse model of focal segmental glomerulosclerosis.

Eric W Brunskill, S Steven Potter

Open access · goldAbstract read
In one paragraph

Article in BMC nephrology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Eric W BrunskillCincinnati Children's Medical Center, 3333 Burnet Ave., Cincinnati, OH, 45229, USA. Eric.Brunskill@cchmc.org.
S Steven PotterCincinnati Children's Medical Center, 3333 Burnet Ave., Cincinnati, OH, 45229, USA. Steve.Potter@cchmc.org.
Cincinnati Children's Hospital Medical Center · US

Funding

Proteomics CoreP50DK096418 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI DEVARAJAN, PRASAD · 2012 to 2021
$8.4M
Glomerulosclerosis in Human FSGS and Animal ModelsR01DK081489 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI POTTER, S. STEVEN · 2009 to 2010
$700k
NIDDK NIH HHS P50 DK096418NIDDK NIH HHS R01 DK081489
6 · The paper itself

Abstract

backgroundMutations in several genes expressed in podocytes, including Cd2ap, have been associated with focal segmental glomerulosclerosis in humans. Mutant mouse models provide an opportunity to better understand the molecular pathology that drives these diseases.

methodsIn this report we use a battery of transgenic-GFP mice to facilitate the purification of all three major cell types of the glomerulus from Cd2ap mutant mice. Both microarrays and RNA-seq were used to characterize the gene expression profiles of the podocytes, mesangial cells and endothelial cells, providing a global dual platform cross-validating dataset.

resultsThe mesangial cells showed increased expression of profibrotic factors, including thrombospondin, Tgfb2 and Tgfb3, as well as the angiogenesis factor Vegf. They also showed upregulation of protective genes, including Aldh1a2, involved in retinoic acid synthesis and Decorin, a Tgfb antagonist. Of interest, the mesangial cells also showed significant expression of Wt1, which has generally been considered podocyte specific. The Cd2ap mutant podocytes showed upregulation of proteases as well as genes involved in muscle and vasculature development and showed a very strong gene expression signature indicating programmed cell death. Endothelial cells showed increased expression of the leukocyte adhesion associated factors Vcam1 and Sele, as well as Midkine (promoting angiogenesis), endothelin and many genes responsive to cytokines and interferons.

conclusionsThis study provides a comprehensive analysis of the changing properties of the three cell types of the glomerulus in Cd2ap mutants, identifying activated and repressed pathways and responsible genes, thereby delivering a deeper molecular understanding of this genetic disease.

Indexed as

Adaptor Proteins, Signal TransducingAldehyde DehydrogenaseAldehyde Dehydrogenase 1 FamilyAnimalsCytoskeletal ProteinsDecorinDisease Models, AnimalEndothelial CellsEndothelinsE-SelectinGene Expression ProfilingGlomerulosclerosis, Focal SegmentalIntercellular Signaling Peptides and ProteinsKidney GlomerulusMesangial CellsMiceAdaptor Proteins, Signal TransducingAldehyde DehydrogenaseAldehyde Dehydrogenase 1 FamilyAldh1a2 protein, mouseCD2-associated proteinCytoskeletal ProteinsDcn protein, mouseDecorinEndothelinsE-SelectinIntercellular Signaling Peptides and ProteinsMdk protein, mouseMidkineRepressor ProteinsRetinal DehydrogenaseTgfb2 protein, mouseTgfb3 protein, mouseThrombospondinsTransforming Growth Factor beta2Transforming Growth Factor beta3Vascular Cell Adhesion Molecule-1Vascular Endothelial Growth Factor Avascular endothelial growth factor A, mouseWT1 protein, mouseWT1 Proteins

Identifiers

PMID25968128
PMCPMC4430919
OpenAlexW1942399788

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.