Evidence map›Paper›PMID 25967938›Full record

ArticleEcotoxicology (London, England)2015

Genetic population structure of polychaeta Neanthes glandicincta (Nereididae) of the Mai Po Inner Deep Bay Ramsar Site, Hong Kong.

Ping-Ping Shen, Ji-Dong Gu

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Article in Ecotoxicology (London, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Ping-Ping ShenKey Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, 510301, China. pshen@scsio.ac.cn.
Ji-Dong GuLaboratory of Environmental Toxicology, School of Biological Sciences, The University of Hong Kong, Pokfulam Road, Pokfulam, Hong Kong. jdgu@hkucc.hku.hk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neanthes glandicincta (Nereididae, Polychaeta) is the first numerically dominant benthic infauna in the Mai Po international Ramsar site, Hong Kong and also an economically important species for food source of birds and fishes. In present study, highly conserved nuclear ribosomal DNA (SSU and LSU rDNA) and mitochondrial COI gene were employed to study the population structure of N. glandicincta in the subtropical mudflat. The specimens were collected from five localities in February 2006, February-August 2007 and preserved at -80 °C, methanol or formalin, respectively. DNA extraction efficiency was the highest in fresh materials and lowest in formalin-fixed samples. The 18S (1774 bp), 28S D1 (383 bp) and COI genes were sequenced and analyzed. Both 18S and 28S D1 rDNA were highly conserved and showed no difference among the populations, whereas COI gene exhibited relatively high-level intraspecific polymorphism (2.2 %). The population from onshore and near mangrove station was phylogenetic different from other sites, indicating restricted gene exchange between the region of river mouth and mangrove forest. The mangrove may form a barrier for the dispersal of pelagic/benthic larvae of the population, which indicates that the population genetic difference is related to different habitats.

Indexed as

Polymorphism, GeneticAnimalsElectron Transport Complex IVHong KongMitochondrial ProteinsMolecular Sequence DataPhylogenyPolychaetaRNA, Ribosomal, 18SRNA, Ribosomal, 28SSequence Analysis, DNAElectron Transport Complex IVMitochondrial ProteinsRNA, Ribosomal, 18SRNA, Ribosomal, 28S18S rDNA28S rDNAMitochondrial COI geneNeanthes glandicinctaPhylogenetic analysis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.