Evidence map›Paper›PMID 25966989›Full record

ArticleBMC microbiology2015

Heat fixation inactivates viral and bacterial pathogens and is compatible with downstream MALDI mass spectrometry tissue imaging.

Lisa H Cazares, Sean A Van Tongeren, Julie Costantino, Tara Kenny, Nicole L Garza, Ginger Donnelly, Douglas Lane, Rekha G Panchal, Sina Bavari

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  6. Single cell metabolism: current and future trends.Metabolomics : Official journal of the Metabolomic Society · 2022
    Review
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  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Lisa H CazaresHenry M. Jackson Foundation, Maryland, USA. lisa.h.cazares.ctr@mail.mil.
Sean A Van TongerenDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. sean.a.vantongeren.ctr@mail.mil.
Julie CostantinoDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. julie.costantino@lonza.com.
Tara KennyDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. tara.a.kenny.ctr@mail.mil.
Nicole L GarzaDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. nicole.l.lackemeyer.ctr@mail.mil.
Ginger DonnellyDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. ginger.c.donnelly.ctr@mail.mil.
Douglas LaneDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. doug.j.lane.ctr@mail.mil.
Rekha G PanchalDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. rekha.g.panchal.civ@mail.mil.
Sina BavariDivision of Molecular and Translational Sciences, US Army Medical Research Institute for Infectious Diseases (USAMRIID) Fort Detrick, Maryland, USA. sina.bavari.civ@mail.mil.
United States Army Medical Research Institute of Infectious Diseases · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTissue samples should be fixed and permanently stabilized as soon as possible ex-vivo to avoid variations in proteomic content. Tissues collected from studies involving infectious microorganisms, must face the additional challenge of pathogen inactivation before downstream proteomic analysis can be safely performed. Heat fixation using the Denator Stabilizor System (Gothenburg, Sweden) utilizes conductive heating, under a mild vacuum, to rapidly eliminate enzymatic degradation in tissue samples. Although many studies have reported on the ability of this method to stop proteolytic degradation and other sample changes immediately and permanently, pathogen inactivation has not been studied.

resultsWe examined the ability of the heat fixation workflow to inactivate bacterial and viral pathogens and the suitability of this tissue for Matrix Assisted Laser Desorption Ionization mass spectrometry imaging (MALDI-MSI). Mice were infected with viral or bacterial pathogens representing two strains of Venezuelan Equine Encephalitis virus (VEEV) and two strains of Burkholderia. Additionally, a tissue mimetic model was employed using Escherichia, Klebsiella and Acinetobacter isolates. Infected tissue samples harvested from each animal or mimetic model were sectioned in half. One half was heat fixed and the other remained untreated. Lysates from each sample were checked for organism viability by performing plaque (infectivity) assays or plating on nutrient agar for colony forming unit (CFU) calculation. Untreated infected control tissue demonstrated the presence of each viable pathogen by positive plaque or colony formation, whereas heat fixation resulted in complete inactivation of both the viral and bacterial pathogens. MALDI-MSI images produced from heat fixed tissue were reflective of molecular distributions within brain, spleen and lung tissue structures.

conclusionsWe conclude that heat fixation inactivates viral and bacterial pathogens and is compatible with proteomic analysis by MALDI-MSI. This treatment will enable the use of infected tissue from studies performed in bio-safety level 3 laboratories with VEEV and Burkholderia to be safely used for proteomic, small molecule drug detection, and imaging mass spectrometry analysis.

Indexed as

AnimalsColony Count, MicrobialContainment of BiohazardsDisinfectionHot TemperatureMiceMicrobial ViabilitySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTissue FixationViral Plaque Assay

Identifiers

PMID25966989
PMCPMC4429342
OpenAlexW1511840405

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.