Evidence map›Paper›PMID 25966682›Full record

ArticleMolecular brain2015

Tfap2a and 2b act downstream of Ptf1a to promote amacrine cell differentiation during retinogenesis.

Kangxin Jin, Haisong Jiang, Dongchang Xiao, Min Zou, Jun Zhu, Mengqing Xiang

Open access · goldAbstract read
In one paragraph

Article in Molecular brain, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 76 citations in OpenAlex.

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  11. The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
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  17. Frontiers in cell and developmental biology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kangxin JinState Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 South Xianlie Road, Guangzhou, 510060, China. kxjin@yahoo.com.
Haisong JiangCenter for Advanced Biotechnology and Medicine and Department of Pediatrics, Rutgers University-Robert Wood Johnson Medical School, 679 Hoes Lane West, Piscataway, NJ, 08854, USA. hjiang14@jhmi.edu.
Dongchang XiaoState Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 South Xianlie Road, Guangzhou, 510060, China. xdc1115@163.com.
Min ZouCenter for Advanced Biotechnology and Medicine and Department of Pediatrics, Rutgers University-Robert Wood Johnson Medical School, 679 Hoes Lane West, Piscataway, NJ, 08854, USA. mz2484@columbia.edu.
Jun ZhuSystems Biology Center, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, 20892, USA. jun.zhu@nih.gov.
Mengqing XiangState Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 South Xianlie Road, Guangzhou, 510060, China. xiang@cabm.rutgers.edu.
Rutgers, The State University of New Jersey · USJohns Hopkins University · USNational Institutes of Health · US

Funding

DNA Sequencing Core (DSC)ZICHL006058 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI ZHU, JUN · 2010 to 2016
$16.6M
Transcriptional Regulation of Retinal DevelopmentR01EY012020 · NEI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI XIANG, MENGQING · 1998 to 2012
$3.7M
Dll4 Gene Regulation and Function during RetinogenesisR01EY020849 · NEI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI XIANG, MENGQING · 2010 to 2013
$1.5M
NEI NIH HHS R01 EY012020NEI NIH HHS R01 EY020849
6 · The paper itself

Abstract

Retinogenesis is a precisely controlled developmental process during which different types of neurons and glial cells are generated under the influence of intrinsic and extrinsic factors. Three transcription factors, Foxn4, RORβ1 and their downstream effector Ptf1a, have been shown to be indispensable intrinsic regulators for the differentiation of amacrine and horizontal cells. At present, however, it is unclear how Ptf1a specifies these two cell fates from competent retinal precursors. Here, through combined bioinformatic, molecular and genetic approaches in mouse retinas, we identify the Tfap2a and Tfap2b transcription factors as two major downstream effectors of Ptf1a. RNA-seq and immunolabeling analyses show that the expression of Tfap2a and 2b transcripts and proteins is dramatically downregulated in the Ptf1a null mutant retina. Their overexpression is capable of promoting the differentiation of glycinergic and GABAergic amacrine cells at the expense of photoreceptors much as misexpressed Ptf1a is, whereas their simultaneous knockdown has the opposite effect. Given the demonstrated requirement for Tfap2a and 2b in horizontal cell differentiation, our study thus defines a Foxn4/RORβ1-Ptf1a-Tfap2a/2b transcriptional regulatory cascade that underlies the competence, specification and differentiation of amacrine and horizontal cells during retinal development.

Indexed as

Cell DifferentiationNeurogenesisAmacrine CellsAnimalsDown-RegulationEmbryo, MammalianEye ProteinsForkhead Transcription FactorsGene Knockdown TechniquesMice, Inbred C57BLModels, BiologicalMutationRetinaRetinal Horizontal CellsSequence Analysis, RNATranscription Factor AP-2Eye ProteinsForkhead Transcription FactorsFoxn4 protein, mouseTfap2a protein, mouseTfap2b protein, mouseTranscription Factor AP-2transcription factor PTF1Transcription Factors

Identifiers

PMID25966682
PMCPMC4429372
OpenAlexW1604956957

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.