Evidence map›Paper›PMID 25965315›Full record

ArticleMolecular immunology2015

A broad range of mutations in HIV-1 neutralizing human monoclonal antibodies specific for V2, V3, and the CD4 binding site.

Liuzhe Li, Xiao-Hong Wang, Constance Williams, Barbara Volsky, Olivia Steczko, Michael S Seaman, Kalpana Luthra, Phillipe Nyambi, Arthur Nadas, Véronique Giudicelli and 3 more

Abstract read
In one paragraph

Article in Molecular immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. IMGTBiomolecules · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Liuzhe LiDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Xiao-Hong WangVeterans Affairs Medical Center, New York, NY 10010, USA.
Constance WilliamsDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Barbara VolskyDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Olivia SteczkoDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Michael S SeamanCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Boston, MA 02215, USA.
Kalpana LuthraAll India Institute of Medical Sciences, New Delhi, India.
Phillipe NyambiDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA.
Arthur NadasInstitute of Environmental Medicine, New York University School of Medicine, New York, NY 10016, USA.
Véronique GiudicelliIMGT(®), The International ImMunoGeneTics Information System(®), CNRS, Montpellier University, Montpellier, France.
Marie-Paule LefrancIMGT(®), The International ImMunoGeneTics Information System(®), CNRS, Montpellier University, Montpellier, France.
Susan Zolla-PaznerDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA; Veterans Affairs Medical Center, New York, NY 10010, USA.
Miroslaw K GornyDepartment of Pathology, New York University School of Medicine, New York, NY 10016, USA. Electronic address: mirek.gorny@nyumc.org.

Funding

Vaccines to Induce Functional Antibodies Targeting the V2 Loop P01AI100151 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WANG, SHIXIA · 2012 to 2017
$15.4M
PROTECTIVE HUMAN MONOCLONAL ANTIBODIES TO HIV1R01HL059725 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZOLLA-PAZNER, SUSAN B · 1997 to 2014
$8.8M
IMMUNOLOGIC RELATEDNESS AMONG AND BETWEEN HIV-1 SUBTYPESR01AI036085 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZOLLA-PAZNER, SUSAN B · 1994 to 2008
$5.3M
Production of Cross-Neutralizing HIV-1 Antibodies from Single B CellsR56AI091543 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GORNY, MIROSLAW K · 2011 to 2014
$934k
Induction of HIV Neutralizing Antibodies by Targeting Macaque B Cell ReceptorsR21AI096977 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GORNY, MIROSLAW K · 2012 to 2014
$579k
NHLBI NIH HHS HL59725NHLBI NIH HHS R01 HL059725NIAID NIH HHS AI091543NIAID NIH HHS AI096977NIAID NIH HHS AI36085NIAID NIH HHS P01 AI100151NIAID NIH HHS R01 AI036085NIAID NIH HHS R21 AI096977NIAID NIH HHS R56 AI091543
6 · The paper itself

Abstract

The HIV vaccine-induced neutralizing antibodies (Abs) display low rates of mutation in their variable regions. To determine the range of neutralization mediated by similar human monoclonal Abs (mAbs) but derived from unselected chronically HIV-1 infected subjects, we tested a panel of 66 mAbs specific to V3, CD4 binding site (CD4bs) and V2 regions. The mAbs were tested against 41 pseudoviruses, including 15 tier 1 and 26 tier 2, 3 viruses, showing that the neutralization potency and breadth of anti-V3 mAbs were significantly higher than those of the anti-CD4bs and anti-V2 mAbs, and only anti-V3 mAbs were able to neutralize some tier 2, 3 viruses. The percentage of mutations in the variable regions of the heavy (VH) and light (VL) chains varied broadly in a range from 2% to 18% and correlated moderately with the neutralization breadth of tier 2, 3 viruses. There was no correlation with neutralization of tier 1 viruses as some mAbs with low and high percentages of mutations neutralized the same number of viruses. The electrostatic interactions between anti-V3 mAbs and the charged V3 region may contribute to their neutralization because the isoelectric points of the VH CDR3 of 48 anti-V3 mAbs were inversely correlated with the neutralization breadth of tier 2, 3 viruses. The results demonstrate that infection-induced antibodies to CD4bs, V3 and V2 regions can mediate cross-clade neutralization despite low levels of mutations which can be achieved by HIV-1 vaccine-induced antibodies.

Indexed as

MutationAntibodies, NeutralizingAntibodies, ViralBinding SitesCD4 AntigensGene ExpressionHIV-1HIV Envelope Protein gp120HIV InfectionsHumansHybridomasImmunoglobulin Variable RegionProtein BindingAntibodies, NeutralizingAntibodies, ViralCD4 Antigensgp120 protein, Human immunodeficiency virus 1HIV Envelope Protein gp120Immunoglobulin Variable RegionCD4 binding siteHIV-1HIV neutralizing antibodiesHuman monoclonal antibodiesSomatic mutationV2 regionV3 region

Identifiers

PMID25965315
PMCPMC4461508

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.