Evidence map›Paper›PMID 25964796›Full record

ArticleFrontiers in genetics2015

Trypanosomosis: potential driver of selection in African cattle.

Anamarija Smetko, Albert Soudre, Katja Silbermayr, Simone Müller, Gottfried Brem, Olivier Hanotte, Paul J Boettcher, Alessandra Stella, Gábor Mészáros, Maria Wurzinger and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 5 countries.

Anamarija SmetkoDivision of Livestock Sciences, Department of Sustainable Agricultural Systems, BOKU-University of Natural Resources and Life Sciences Vienna Vienna, Austria ; Croatian Agricultural Agency Zagreb, Croatia.
Albert SoudreDivision of Livestock Sciences, Department of Sustainable Agricultural Systems, BOKU-University of Natural Resources and Life Sciences Vienna Vienna, Austria ; Ecole Normale Supérieure, Université de Koudougou Koudougou, Burkina Faso.
Katja SilbermayrInstitute of Parasitology, University of Veterinary Medicine Vienna, Austria.
Simone MüllerInstitute of Animal Breeding and Genetics, University of Veterinary Medicine Vienna, Austria.
Gottfried BremInstitute of Animal Breeding and Genetics, University of Veterinary Medicine Vienna, Austria.
Olivier HanotteSchool of Life Sciences, University of Nottingham Nottingham, UK.
Paul J BoettcherAnimal Production and Health Division, Agriculture and Consumer Protection Department, Food and Agriculture Organization of the United Nations Rome, Italy ; FAO/IAEA Joint Division on Nuclear Techniques in Food and Agriculture Vienna, Austria.
Alessandra StellaParco Tecnologico Padano Lodi, Italy.
Gábor MészárosDivision of Livestock Sciences, Department of Sustainable Agricultural Systems, BOKU-University of Natural Resources and Life Sciences Vienna Vienna, Austria.
Maria WurzingerDivision of Livestock Sciences, Department of Sustainable Agricultural Systems, BOKU-University of Natural Resources and Life Sciences Vienna Vienna, Austria.
Ino CurikFaculty of Agriculture, University of Zagreb Zagreb, Croatia.
Mathias MüllerInstitute of Animal Breeding and Genetics, University of Veterinary Medicine Vienna, Austria.
Jörg BurgstallerInstitute of Animal Breeding and Genetics, University of Veterinary Medicine Vienna, Austria ; Biotechnology in Animal Production, Department for Agrobiotechnology, IFA Tulln Tulln, Austria.
Johann SölknerDivision of Livestock Sciences, Department of Sustainable Agricultural Systems, BOKU-University of Natural Resources and Life Sciences Vienna Vienna, Austria.
University of Veterinary Medicine Vienna · ATBOKU University · ATInternational Atomic Energy Agency · ATParco Tecnologico Padano · ITUniversity of Koudougou · BFUniversity of Nottingham · GBUniversity of Zagreb · HR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trypanosomosis is a serious cause of reduction in productivity of cattle in tsetse-fly infested areas. Baoule and other local Taurine cattle breeds in Burkina Faso are trypanotolerant. Zebuine cattle, which are also kept there are susceptible to trypanosomosis but bigger in body size. Farmers have continuously been intercrossing Baoule and Zebu animals to increase production and disease tolerance. The aim of this study was to compare levels of zebuine and taurine admixture in genomic regions potentially involved in trypanotolerance with background admixture of composites to identify differences in allelic frequencies of tolerant and non-tolerant animals. The study was conducted on 214 animals (90 Baoule, 90 Zebu, and 34 composites), genotyped with 25 microsatellites across the genome and with 155 SNPs in 23 candidate regions. Degrees of admixture of composites were analyzed for microsatellite and SNP data separately. Average Baoule admixture based on microsatellites across the genomes of the Baoule- Zebu composites was 0.31, which was smaller than the average Baoule admixture in the trypanosomosis candidate regions of 0.37 (P = 0.15). Fixation index F ST measured in the overall genome based on microsatellites or with SNPs from candidate regions indicates strong differentiation between breeds. Nine out of 23 regions had F ST ≥ 0.20 calculated from haplotypes or individual SNPs. The levels of admixture were significantly different from background admixture, as revealed by microsatellite data, for six out of the nine regions. Five out of the six regions showed an excess of Baoule ancestry. Information about best levels of breed composition would be useful for future breeding ctivities, aiming at trypanotolerant animals with higher productive capacity.

Indexed as

BaoulecompositecrosstolerancetrypanosomeZebu

Identifiers

PMID25964796
PMCPMC4404968
OpenAlexW1998813228

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.