Evidence map›Paper›PMID 25964470›Full record

ArticleInfection and immunity2015

Interaction of Salmonella enterica Serovar Typhimurium with Intestinal Organoids Derived from Human Induced Pluripotent Stem Cells.

Jessica L Forbester, David Goulding, Ludovic Vallier, Nicholas Hannan, Christine Hale, Derek Pickard, Subhankar Mukhopadhyay, Gordon Dougan

Open access · hybridAbstract read
In one paragraph

Article in Infection and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 163 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
163citing papers in PubMed, 1 pooled it
23.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

163 citing papers in PubMed, 1 synthesis or guideline pooled it, 277 citations in OpenAlex.

  1. Advances in Engineering Human Tissue Models.Frontiers in bioengineering and biotechnology · 2020
    Pooled it
  2. Review
  3. Article
  4. Review
  5. Emerging advances in intestinal models for in vitro preclinical research.American journal of physiology. Gastrointestinal and liver physiology · 2025
    Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Intestinal organ chips for disease modelling and personalized medicine.Nature reviews. Gastroenterology & hepatology · 2024
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review

103 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jessica L ForbesterWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
David GouldingWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
Ludovic VallierWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom Wellcome Trust-Medical Research Council Stem Cell Institute, Anne McLaren Laboratory, Department of Surgery, West Forvie Site, University of Cambridge, Cambridge, United Kingdom.
Nicholas HannanWellcome Trust-Medical Research Council Stem Cell Institute, Anne McLaren Laboratory, Department of Surgery, West Forvie Site, University of Cambridge, Cambridge, United Kingdom.
Christine HaleWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
Derek PickardWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
Subhankar MukhopadhyayWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
Gordon DouganWellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom gd1@sanger.ac.uk.
Wellcome Sanger Institute · GBWellcome/MRC Cambridge Stem Cell Institute · GB

Funding

Medical Research Council G0701448Medical Research Council G0800784Medical Research Council G1000847Wellcome Trust 100891Wellcome Trust 97922
6 · The paper itself

Abstract

The intestinal mucosa forms the first line of defense against infections mediated by enteric pathogens such as salmonellae. Here we exploited intestinal "organoids" (iHOs) generated from human induced pluripotent stem cells (hIPSCs) to explore the interaction of Salmonella enterica serovar Typhimurium with iHOs. Imaging and RNA sequencing were used to analyze these interactions, and clear changes in transcriptional signatures were detected, including altered patterns of cytokine expression after the exposure of iHOs to bacteria. S. Typhimurium microinjected into the lumen of iHOs was able to invade the epithelial barrier, with many bacteria residing within Salmonella-containing vacuoles. An S. Typhimurium invA mutant defective in the Salmonella pathogenicity island 1 invasion apparatus was less capable of invading the iHO epithelium. Hence, we provide evidence that hIPSC-derived organoids are a promising model of the intestinal epithelium for assessing interactions with enteric pathogens.

Indexed as

Host-Pathogen InteractionsBacterial ProteinsCytokinesEpithelial CellsGene DeletionGene Expression ProfilingHumansInduced Pluripotent Stem CellsModels, TheoreticalOptical ImagingOrganoidsSalmonella typhimuriumVacuolesBacterial ProteinsCytokinesinvA protein, Bacteria

Identifiers

PMID25964470
PMCPMC4468523
OpenAlexW1878295921

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.