Evidence map›Paper›PMID 25963835›Full record

ArticleMolecular & cellular proteomics : MCP2015

Cell Surface Proteomics Provides Insight into Stage-Specific Remodeling of the Host-Parasite Interface in Trypanosoma brucei.

Michelle M Shimogawa, Edwin A Saada, Ajay A Vashisht, William D Barshop, James A Wohlschlegel, Kent L Hill

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
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  3. Article
  4. Fatty acid uptake inFrontiers in cellular and infection microbiology · 2022
    Review
  5. Frontiers in molecular biosciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Michelle M ShimogawaFrom the ‡Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, California, 90095;
Edwin A SaadaFrom the ‡Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, California, 90095;
Ajay A Vashisht§Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California 90095;
William D Barshop§Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California 90095;
James A Wohlschlegel§Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California 90095; ¶Molecular Biology Institute, University of California Los Angeles, Los Angeles, California 90095 kenthill@mednet.ucla.edu jwohl@mednet.ucla.edu.
Kent L HillFrom the ‡Department of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, California, 90095; ¶Molecular Biology Institute, University of California Los Angeles, Los Angeles, California 90095 kenthill@mednet.ucla.edu jwohl@mednet.ucla.edu.
University of California, Los Angeles · US

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Biochemical and Functional Analysis of TrypaninR01AI052348 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HILL, KENT L · 2002 to 2023
$7.4M
Proteolytic Control of Iron Metabolism by the Ubiquitin Ligase FBXL5R01GM089778 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WOHLSCHLEGEL, JAMES AKIRA · 2010 to 2023
$4.0M
PREDOCTORAL TRAINING PROGRAM IN GENETIC MECHANISMS AT UCT32GM007104 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GOBER, JAMES W · 1985 to 2011
$3.6M
Host-specific cell surface receptors on African trypanosomesR21AI094333 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HILL, KENT L · 2012 to 2013
$424k
Trypanosome surface protein targeting and function at the host-parasite interfaceF32AI094750 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SHIMOGAWA, MICHELLE M · 2012 to 2014
$163k
NIAID NIH HHS F32 AI094750NIAID NIH HHS F32-AI094750NIAID NIH HHS R01 AI052348NIAID NIH HHS R01AI052348NIAID NIH HHS R21 AI094333NIAID NIH HHS R21AI094333-02NIGMS NIH HHS GM007185NIGMS NIH HHS GM07104NIGMS NIH HHS GM089778NIGMS NIH HHS R01 GM089778NIGMS NIH HHS T32 GM007104NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

African trypanosomes are devastating human and animal pathogens transmitted by tsetse flies between mammalian hosts. The trypanosome surface forms a critical host interface that is essential for sensing and adapting to diverse host environments. However, trypanosome surface protein composition and diversity remain largely unknown. Here, we use surface labeling, affinity purification, and proteomic analyses to describe cell surface proteomes from insect-stage and mammalian bloodstream-stage Trypanosoma brucei. The cell surface proteomes contain most previously characterized surface proteins. We additionally identify a substantial number of novel proteins, whose functions are unknown, indicating the parasite surface proteome is larger and more diverse than generally appreciated. We also show stage-specific expression for individual paralogs within several protein families, suggesting that fine-tuned remodeling of the parasite surface allows adaptation to diverse host environments, while still fulfilling universally essential cellular needs. Our surface proteome analyses complement existing transcriptomic, proteomic, and in silico analyses by highlighting proteins that are surface-exposed and thereby provide a major step forward in defining the host-parasite interface.

Indexed as

Host-Parasite InteractionsAdaptation, PhysiologicalAnimalsCell MembraneDatabases, ProteinHumansLife Cycle StagesMultigene FamilyParasitesProteomeProteomicsProtozoan ProteinsTrypanosoma brucei bruceiVariant Surface Glycoproteins, TrypanosomaProteomeProtozoan ProteinsVariant Surface Glycoproteins, Trypanosoma

Identifiers

PMID25963835
PMCPMC4587323
OpenAlexW1944012495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.