Evidence map›Paper›PMID 25963832›Full record

ArticleNature communications2015

Conformational rearrangements in the transmembrane domain of CNGA1 channels revealed by single-molecule force spectroscopy.

Sourav Maity, Monica Mazzolini, Manuel Arcangeletti, Alejandro Valbuena, Paolo Fabris, Marco Lazzarino, Vincent Torre

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sourav MaityInternational School for Advanced Studies (SISSA) Neuroscience Area, via Bonomea 265, Trieste 34136, Italy.
Monica MazzoliniInternational School for Advanced Studies (SISSA) Neuroscience Area, via Bonomea 265, Trieste 34136, Italy.
Manuel ArcangelettiInternational School for Advanced Studies (SISSA) Neuroscience Area, via Bonomea 265, Trieste 34136, Italy.
Alejandro ValbuenaInternational School for Advanced Studies (SISSA) Neuroscience Area, via Bonomea 265, Trieste 34136, Italy.
Paolo FabrisInternational School for Advanced Studies (SISSA) Neuroscience Area, via Bonomea 265, Trieste 34136, Italy.
Marco LazzarinoCBM S.c.r.l., Area Science Park, Basovizza, Trieste 34149, Italy.
Vincent TorreInternational School for Advanced Studies (SISSA) Neuroscience Area, via Bonomea 265, Trieste 34136, Italy.
Scuola Internazionale Superiore di Studi Avanzati · ITAREA Science Park · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclic nucleotide-gated (CNG) channels are activated by binding of cyclic nucleotides. Although structural studies have identified the channel pore and selectivity filter, conformation changes associated with gating remain poorly understood. Here we combine single-molecule force spectroscopy (SMFS) with mutagenesis, bioinformatics and electrophysiology to study conformational changes associated with gating. By expressing functional channels with SMFS fingerprints in Xenopus laevis oocytes, we were able to investigate gating of CNGA1 in a physiological-like membrane. Force spectra determined that the S4 transmembrane domain is mechanically coupled to S5 in the closed state, but S3 in the open state. We also show there are multiple pathways for the unfolding of the transmembrane domains, probably caused by a different degree of α-helix folding. This approach demonstrates that CNG transmembrane domains have dynamic structure and establishes SMFS as a tool for probing conformational change in ion channels.

Indexed as

AnimalsComputational BiologyCyclic Nucleotide-Gated Cation ChannelsElectrophysiological PhenomenaFemaleGene Expression RegulationIon Channel GatingOvarian FollicleProtein ConformationProtein Structure, TertiarySpectrum AnalysisXenopus laevisCNGA1 protein, bovineCyclic Nucleotide-Gated Cation Channels

Identifiers

PMID25963832
PMCPMC4432583
OpenAlexW217326010

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.