Evidence map›Paper›PMID 25963654›Full record

ArticleMolecular and cellular biology2015

Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining.

Matthew Jessulat, Ramy H Malty, Diem-Hang Nguyen-Tran, Viktor Deineko, Hiroyuki Aoki, James Vlasblom, Katayoun Omidi, Ke Jin, Zoran Minic, Mohsen Hooshyar and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 37 citations in OpenAlex.

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  10. Lithium Chloride Sensitivity in Yeast and Regulation of Translation.International journal of molecular sciences · 2020
    Article
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  16. Consider the workhorse: Nonhomologous end-joining in budding yeast.Biochemistry and cell biology = Biochimie et biologie cellulaire · 2016
    Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 2 countries.

Matthew JessulatDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada Department of Biology and Ottawa Institute of Systems Biology, Carleton University, Ottawa, Ontario, Canada.
Ramy H MaltyDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
Diem-Hang Nguyen-TranDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
Viktor DeinekoDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
Hiroyuki AokiDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
James VlasblomDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
Katayoun OmidiDepartment of Biology and Ottawa Institute of Systems Biology, Carleton University, Ottawa, Ontario, Canada.
Ke JinDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada Banting and Best Department of Medical Research, Donnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Zoran MinicDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
Mohsen HooshyarDepartment of Biology and Ottawa Institute of Systems Biology, Carleton University, Ottawa, Ontario, Canada.
Daniel BurnsideDepartment of Biology and Ottawa Institute of Systems Biology, Carleton University, Ottawa, Ontario, Canada.
Bahram SamanfarDepartment of Biology and Ottawa Institute of Systems Biology, Carleton University, Ottawa, Ontario, Canada.
Sadhna PhanseDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada.
Tanya FreywaldCancer Research Unit, Saskatchewan Cancer Agency, Saskatoon, Saskatchewan, Canada.
Bhanu PrasadDepartment of Medicine, Regina Qu'Appelle Health Region, Regina, Saskatchewan, Canada.
Zhaolei ZhangBanting and Best Department of Medical Research, Donnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Franco VizeacoumarCancer Research Unit, Saskatchewan Cancer Agency, Saskatoon, Saskatchewan, Canada.
Nevan J KroganDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, California, USA.
Andrew FreywaldCancer Research Unit, Saskatchewan Cancer Agency, Saskatoon, Saskatchewan, Canada.
Ashkan GolshaniDepartment of Biology and Ottawa Institute of Systems Biology, Carleton University, Ottawa, Ontario, Canada ashkan_golshani@carleton.ca mohan.babu@uregina.ca.
Mohan BabuDepartment of Biochemistry, Research and Innovation Centre, University of Regina, Regina, Saskatchewan, Canada ashkan_golshani@carleton.ca mohan.babu@uregina.ca.
University of Regina · CACarleton University · CASaskatchewan Cancer Agency · CAUniversity of Toronto · CARegina Qu'Appelle Health Region · CAUniversity of California, San Francisco · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Canadian Institutes of Health Research MOP-125952NIAID NIH HHS P30 AI027763
6 · The paper itself

Abstract

The nonhomologous end-joining (NHEJ) pathway is essential for the preservation of genome integrity, as it efficiently repairs DNA double-strand breaks (DSBs). Previous biochemical and genetic investigations have indicated that, despite the importance of this pathway, the entire complement of genes regulating NHEJ remains unknown. To address this, we employed a plasmid-based NHEJ DNA repair screen in budding yeast (Saccharomyces cerevisiae) using 369 putative nonessential DNA repair-related components as queries. Among the newly identified genes associated with NHEJ deficiency upon disruption are two spindle assembly checkpoint kinases, Bub1 and Bub2. Both observation of resulting phenotypes and chromatin immunoprecipitation demonstrated that Bub1 and -2, either alone or in combination with cell cycle regulators, are recruited near the DSB, where phosphorylated Rad53 or H2A accumulates. Large-scale proteomic analysis of Bub kinases phosphorylated in response to DNA damage identified previously unknown kinase substrates on Tel1 S/T-Q sites. Moreover, Bub1 NHEJ function appears to be conserved in mammalian cells. 53BP1, which influences DSB repair by NHEJ, colocalizes with human BUB1 and is recruited to the break sites. Thus, while Bub is not a core component of NHEJ machinery, our data support its dual role in mitotic exit and promotion of NHEJ repair in yeast and mammals.

Indexed as

DNA Breaks, Double-StrandedDNA End-Joining RepairDNA RepairCell Cycle ProteinsCell Line, TumorCheckpoint Kinase 2HistonesHumansImmunoblottingIntracellular Signaling Peptides and ProteinsMicroscopy, FluorescenceMitosisMutationPhosphorylationProtein BindingProtein Serine-Threonine KinasesBUB1 protein, humanBub1 protein, S cerevisiaeBUB2 protein, S cerevisiaeCell Cycle ProteinsCheckpoint Kinase 2HistonesIntracellular Signaling Peptides and ProteinsProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1

Identifiers

PMID25963654
PMCPMC4475915
OpenAlexW2153538986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.