Evidence map›Paper›PMID 25961557›Full record

ArticlePloS one2015

Root-Derived Short-Chain Suberin Diacids from Rice and Rape Seed in a Paddy Soil under Rice Cultivar Treatments.

Haishi Ji, Yuanjun Ding, Xiaoyu Liu, Lianqing Li, Dengxiao Zhang, Zichuan Li, Jingling Sun, Muhammad Siddique Lashari, Stephen Joseph, Yuanduo Meng and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 4 countries.

Haishi JiInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Yuanjun DingInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Xiaoyu LiuInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Lianqing LiInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Dengxiao ZhangInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Zichuan LiInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Jingling SunInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Muhammad Siddique LashariInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Stephen JosephInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China; Discipline of Chemistry, University of Newcastle, Callaghan, NSW 2308, Australia.
Yuanduo MengNational Agricultural Technical Extension and Service Center, Beijing, 100026, China.
Yakov KuzyakovDepartment of Soil Science of Temperate Ecosystems, University of Göttingen, Büsgenweg 2, 37077, Göttingen, Germany; Department of Agricultural Soil Science, University of Göttingen, Büsgenweg 2, 37077, Göttingen, Germany; Institute of Environmental Sciences, Kazan Federal University, 420049, Kazan, Russia.
Genxing PanInstitute of Resource, Ecosystem and Environment of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China; Research Center of Terrestrial Ecosystem Carbon Sink and Land Remediation, Zhejiang Agro-Forestry University, Linan, Hangzhou, 311300, China.
Nanjing Agricultural University · CNKazan Federal University · RUZhejiang A & F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Suberin-derived substituted fatty acids have been shown to be potential biomarkers for plant-derived carbon (C) in soils across ecosystems. Analyzing root derived suberin compounds bound in soil could help to understand the root input into a soil organic carbon pool. In this study, bound lipids were extracted and identified in root and topsoil samples. Short-chain suberin diacids were quantified under rice (Oryza sativa L.) and rape (Brassica campestris) rotations with different cultivar combinations in a Chinese rice paddy. After removal of free lipids with sequential extraction, the residual bound lipids were obtained with saponification and derivatization before analysis using gas chromatography-mass spectrometry (GC-MS). Diacids C16 and C18 in bound lipids were detected both in rice and rape root samples, while diacids C20 and C22 were detected only in rape root samples. Accordingly, diacids were quantified in both rhizosphere and bulk soil (0-15 cm). The amount of total root-derived diacids in bulk soil varied in a range of 5.6-9.6 mg/kg across growth stages and crop seasons. After one year-round rice-rape rotation, root-derived suberin diacids were maintained at a level of 7-9 mg/kg in bulk soil; this was higher under a super rice cultivar LY than under a hybrid cultivar IIY. While concentrations of the analyzed diacids were generally higher in rhizosphere than in bulk soil, the total diacid (DA) concentration was higher at the time of rape harvest than at rice harvest, suggesting that rape roots made a major contribution to the preservation of diacids in the paddy. Moreover, the net change in the concentration and the ratios of C16:0 DA to C18:1 DA, and of C16:0 DA to C18:0 DA, over a whole growing season, were greater under LY than under IIY, though there was no difference between cultivars within a single growth stage. Overall, total concentration of root-derived suberin diacids was found to be positively correlated to soil organic carbon concentration both for bulk soil and rhizosphere. However, the turnover and preservation of the root suberin biomolecules with soil property and field conditions deserve further field studies.

Indexed as

BrassicaCarbonDicarboxylic AcidsGas Chromatography-Mass SpectrometryLipidsLiquid-Liquid ExtractionOryzaPlant RootsRhizosphereSaponinsSeedsSoilCarbonDicarboxylic AcidsLipidsSaponinsSoilsuberin

Identifiers

PMID25961557
PMCPMC4427476
OpenAlexW240232324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.