Evidence map›Paper›PMID 25961333›Full record

ArticleThe journal of physical chemistry. B2015

Particle and Energy Pair and Triplet Correlations in Liquids and Liquid Mixtures from Experiment and Simulation.

Elizabeth A Ploetz, Paul E Smith

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Temperature Dependence of Hydrotropy.The journal of physical chemistry. B · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. How Osmolytes Counteract Pressure Denaturation on a Molecular Scale.Chemphyschem : a European journal of chemical physics and physical chemistry · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Elizabeth A PloetzDepartment of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States.
Paul E SmithDepartment of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States.

Funding

Accurate Simulations of Peptide AggregationR01GM079277 · NIGMS · KANSAS STATE UNIVERSITY · PI SMITH, PAUL E · 2007 to 2011
$1.3M
NIGMS NIH HHS R01 GM079277NIGMS NIH HHS R01GM079277
6 · The paper itself

Abstract

Recent advances in fluctuation solution theory (FST) have provided access to information concerning triplet fluctuations and integrals, in addition to the established pair fluctuations and integrals, for liquids and liquid mixtures using both experimental and simulation data. Here, FST is used to investigate pair and triplet correlations for (i) pure water as provided by experiment and simulation using both polarizable and nonpolarizable water models, (ii) liquid mixtures of methanol and water as provided by experiment and simulation, and (iii) native and denatured states of proteins as provided by simulation. The last application is particularly powerful, as it provides exact equations for the volume, enthalpy, compressibility, thermal expansion, and heat capacity of a single protein form provided by a single simulation. In addition, a discussion of the quality of the integrals obtained from experiment and simulation is provided. The results clearly illustrate that FST can be a powerful tool for the analysis and interpretation of both experimental and simulation data in complex liquid mixtures, including biomolecular systems, and that current simulation protocols can provide reliable values for the pair and triplet correlations and integrals.

Indexed as

Models, ChemicalComputer SimulationMethanolProtein ConformationProtein DenaturationProtein PrecursorsThermodynamicsUbiquitinViral Envelope ProteinsWaterMethanolpreS (120-145) peptideProtein PrecursorsUbiquitinViral Envelope ProteinsWater

Identifiers

PMID25961333
PMCPMC12303364

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.