Evidence map›Paper›PMID 25959381›Full record

ArticleCritical care (London, England)2015

Experimental acute lung injury induces multi-organ epigenetic modifications in key angiogenic genes implicated in sepsis-associated endothelial dysfunction.

Karol Bomsztyk, Daniel Mar, Dowon An, Roya Sharifian, Michal Mikula, Sina A Gharib, William A Altemeier, W Conrad Liles, Oleg Denisenko

Open access · goldAbstract read
In one paragraph

Article in Critical care (London, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 61 citations in OpenAlex.

  1. Review
  2. Diffuse alveolar damage, acute respiratory distress syndrome (ARDS), and non-cardiogenic pulmonary edema. Part 1: ARDS endotypes, including systemic inflammatory response syndrome and sepsis, with dog and cat examples.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Epigenetic mechanisms mediate cytochrome P450 1A1 expression and lung endothelial injury caused by MRSA in vitro and in vivo.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  7. Article
  8. Article
  9. ADAM10-a "multitasker" in sepsis: focus on its posttranslational target.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2023
    Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Emerging therapeutic targets for sepsis.Expert opinion on therapeutic targets · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Karol BomsztykUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. karolb@u.washington.edu.
Daniel MarUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. danmar@uw.edu.
Dowon AnUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. dowon@u.washington.edu.
Roya SharifianUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. roya_sharifian@yahoo.com.
Michal MikulaUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. mikula.michal@gmail.com.
Sina A GharibUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. sagharib@u.washington.edu.
William A AltemeierUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. billa@u.washington.edu.
W Conrad LilesUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. wcliles@uw.edu.
Oleg DenisenkoUW Medicine South Lake Union, University of Washington, 850 Republican Street, 98109, Seattle, WA, USA. odenis@u.washington.edu.
University of Washington · USUnion University · US

Funding

Mechanisms of innate immune response modulation by mechanical ventilationR01HL086883 · NHLBI · UNIVERSITY OF WASHINGTON · PI ALTEMEIER, WILLIAM A · 2008 to 2012
$2.2M
PDGFR-beta+ stromal cells as critical regulators of immune response to tissue injuryR01HL122895 · NHLBI · UNIVERSITY OF WASHINGTON · PI ALTEMEIER, WILLIAM A · 2015 to 2018
$1.7M
Acute Renal Failure: An Endotoxin Hyper-Responsive StateR01DK083310 · NIDDK · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL, ZAGER, RICHARD A. · 2010 to 2013
$1.5M
Next generation technology to detect epigenetic alterations in human tissuesR33CA191135 · NCI · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL · 2015 to 2017
$1.3M
Integrated microplate platform for epigenetic analysisR21GM111439 · NIGMS · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL · 2014 to 2016
$601k
NCI NIH HHS R33 CA191135NHLBI NIH HHS R01 HL086883NHLBI NIH HHS R01 HL122895NIDDK NIH HHS NIH R01 DK083310NIDDK NIH HHS R01 DK083310NIDDK NIH HHS R21 DK09881NIGMS NIH HHS R21 GM111439
6 · The paper itself

Abstract

introductionThe Tie2/angiopoietin (Tie2/Ang) and vascular endothelial growth factor receptor-ligand systems (VEGFR/VEGF) are recognized to play important roles in the regulation of microvascular endothelial function. Downregulation of these genes during sepsis has been implicated in the pathogenesis of sepsis-related microvascular leak and multiple organ dysfunction syndrome. Mechanisms responsible for dysregulation of angiogenic genes in sepsis are poorly defined.

methodsWestern blot, reverse transcription-polymerase chain reaction, and multiplex chromatin immunoprecipitation platform (Matrix ChIP) were used to investigate serum albumin leak, changes in gene expression, and associated epigenetic alterations in a murine model of acute lung injury-induced sepsis (ALI-sepsis).

resultsExperimental ALI-sepsis induced microvascular leak and downregulation of expression of Angpt1 (Ang1), Tek (Tie2), and Kdr (Vegfr2 or Flk-1) genes in the lung, kidney, and liver. These changes correlate with a decrease in RNA polymerase II density at these genes, and the greatest response was observed in the lung. ALI-sepsis reduced levels of transcription-permissive histone H3 lysine acetylation (H3KAc) at these loci in all examined tissues. Decreases in permissive H3K4m3 and H3Km2 marks were detected only in the lung. In contrast, only minimal alterations in transcription-repressive histone modifications (H3K27m3, H3K9m2, H3K9m3, and H4K20m3) were observed in all tissues.

conclusionsOur results demonstrate that decreases in transcription-permissive, but not increases in transcription-repressive, histone modifications at Angpt1, Tek, and Kdr are a systemic, rather than a lung-restricted, response, involving key end-organs in experimental ALI-sepsis. Given that ventilator-associated pneumonia is a major cause of sepsis in critically ill patients, elucidation of mechanisms mediating epigenetic alterations during sepsis provides fundamental new insights into the pathogenesis of sepsis-induced microvascular leak and subsequent end-organ injury/dysfunction.

Indexed as

Endothelium, VascularAcute Lung InjuryAngiogenic ProteinsAnimalsEpigenesis, GeneticKidneyLiverLungMiceMicrovesselsSepsisAngiogenic Proteins

Identifiers

PMID25959381
PMCPMC4449602
OpenAlexW2122599558

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.