Evidence map›Paper›PMID 25958245›Full record

ArticleBioorganic & medicinal chemistry letters2015

Discovery of bisamide-heterocycles as inhibitors of scavenger receptor BI (SR-BI)-mediated lipid uptake.

Chris Dockendorff, Patrick W Faloon, Andrew Germain, Miao Yu, Willmen Youngsaye, Partha P Nag, Melissa Bennion, Marsha Penman, Thomas J F Nieland, Sivaraman Dandapani and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Lipid and glucose metabolism in senescence.Frontiers in nutrition · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Chris DockendorffCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA; Department of Chemistry, Marquette University, PO Box 1881, Milwaukee, WI 53201-1881, USA. Electronic address: christopher.dockendorff@marquette.edu.
Patrick W FaloonCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Andrew GermainCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Miao YuDepartment of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.
Willmen YoungsayeCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Partha P NagCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Melissa BennionCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Marsha PenmanDepartment of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.
Thomas J F NielandDepartment of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.
Sivaraman DandapaniCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
José R PerezCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Benito MunozCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Michelle A PalmerCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Stuart L SchreiberCenter for the Science of Therapeutics, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA; Howard Hughes Medical Institute, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA.
Monty KriegerDepartment of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA. Electronic address: krieger@MIT.edu.
Broad Institute · USMassachusetts Institute of Technology · US

Funding

User Driven ProjectU54HG005032 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SCHREIBER, STUART L · 2008 to 2013
$88.1M
Platelets in Cardiovascular Biology and PathologyP01HL066105 · NHLBI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HYNES, RICHARD O · 2001 to 2010
$28.4M
SCAVENGER RECEPTORS--LIGAND BINDING AND PATHOPHYSIOLOGYR01HL052212 · NHLBI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KRIEGER, MONTY · 1994 to 2011
$5.4M
NHGRI NIH HHS U54 HG005032NHLBI NIH HHS P01 HL066105NHLBI NIH HHS R01 HL052212
6 · The paper itself

Abstract

A new series of potent inhibitors of cellular lipid uptake from HDL particles mediated by scavenger receptor, class B, type I (SR-BI) was identified. The series was identified via a high-throughput screen of the National Institutes of Health Molecular Libraries Small Molecule Repository (NIH MLSMR) that measured the transfer of the fluorescent lipid DiI from HDL particles to CHO cells overexpressing SR-BI. The series is characterized by a linear peptidomimetic scaffold with two adjacent amide groups, as well as an aryl-substituted heterocycle. Analogs of the initial hit were rapidly prepared via Ugi 4-component reaction, and select enantiopure compounds were prepared via a stepwise sequence. Structure-activity relationship (SAR) studies suggest an oxygenated arene is preferred at the western end of the molecule, as well as highly lipophilic substituents on the central and eastern nitrogens. Compound 5e, with (R)-stereochemistry at the central carbon, was designated as probe ML279. Mechanistic studies indicate that ML279 stabilizes the interaction of HDL particles with SR-BI, and its effect is reversible. It shows good potency (IC50=17 nM), is non-toxic, plasma stable, and has improved solubility over our alternative probe ML278.

Indexed as

AlanineAnimalsCD36 AntigensCHO CellsCricetinaeCricetulusDrug Evaluation, PreclinicalFuransHeterocyclic CompoundsLipoproteins, HDLProtein BindingStructure-Activity RelationshipTetrazolesAlaninebisamidineCD36 AntigensFuransHeterocyclic CompoundsLipoproteins, HDLML279 compoundTetrazolesCholesterol transportHCVHDL receptorML279SR-BI inhibitor

Identifiers

PMID25958245
PMCPMC4469081
OpenAlexW2032994383

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.