Evidence map›Paper›PMID 25957646›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

Comparative fine mapping of the Wax 1 (W1) locus in hexaploid wheat.

Ping Lu, Jinxia Qin, Guoxin Wang, Lili Wang, Zhenzhong Wang, Qiuhong Wu, Jingzhong Xie, Yong Liang, Yong Wang, Deyun Zhang and 2 more

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
7.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Characterization and Rapid Gene-Mapping of Leaf Lesion Mimic Phenotype ofInternational journal of molecular sciences · 2019
    Article
  6. Article
  7. Article
  8. Molecular mapping and candidate gene analysis of a new epicuticular wax locus in sorghum (Sorghum bicolor L. Moench).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  9. Article
  10. Article
  11. Long noncoding miRNA gene represses wheat β-diketone waxes.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Article
  13. Fine-Mapping and Analysis ofFrontiers in plant science · 2017
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Ping LuState Key Laboratory for Agrobiotechnology/Department of Plant Genetics and Breeding, China Agricultural University, Beijing, 100193, China.
Jinxia Qin
Guoxin Wang
Lili Wang
Zhenzhong Wang
Qiuhong Wu
Jingzhong Xie
Yong Liang
Yong Wang
Deyun Zhang
Qixin Sun
Zhiyong Liu
China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageBy applying comparative genomics analyses, a high-density genetic linkage map of the Wax 1 ( W1 ) locus was constructed as a framework for map-based cloning. Glaucousness is described as the scattering effect of visible light from wax deposited on the cuticle of plant aerial organs. In wheat, the wax on leaves and stems is mainly controlled by two sets of genes: glaucousness loci (W1 and W2) and non-glaucousness loci (Iw1 and Iw2). Bulked segregant analysis (BSA) and simple sequence repeat (SSR) mapping showed that Wax1 (W1) is located on chromosome arm 2BS between markers Xgwm210 and Xbarc35. By applying comparative genomics analyses, colinearity genomic regions of the W1 locus on wheat 2BS were identified in Brachypodium distachyon chromosome 5, rice chromosome 4 and sorghum chromosome 6, respectively. Four STS markers were developed using the Triticum aestivum cv. Chinese Spring 454 contig sequences and the International Wheat Genome Sequencing Consortium (IWGSC) survey sequences. W1 was mapped into a 0.93 cM genetic interval flanked by markers XWGGC3197 and XWGGC2484, which has synteny with genomic regions of 56.5 kb in Brachypodium, 390 kb in rice and 31.8 kb in sorghum. The fine genetic map can serve as a framework for chromosome landing, physical mapping and map-based cloning of the W1 in wheat.

Indexed as

Comparative Genomic HybridizationGenes, PlantGenetic LinkagePhysical Chromosome MappingBrachypodiumBreedingChromosomes, PlantDNA, PlantExpressed Sequence TagsGenetic MarkersMicrosatellite RepeatsPolyploidyTriticumDNA, PlantGenetic Markers

Identifiers

PMID25957646
OpenAlexW610336846

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.