Evidence map›Paper›PMID 25956063›Full record

ArticleBiochemical and biophysical research communications2015

Cu/Zn superoxide dismutase and the proton ATPase Pma1p of Saccharomyces cerevisiae.

J Allen Baron, Janice S Chen, Valeria C Culotta

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Journal of fungi (Basel, Switzerland) · 2022
    Article
  4. Sod1 integrates oxygen availability to redox regulate NADPH production and the thiol redoxome.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

J Allen BaronDepartment of Biochemistry and Molecular Biology, Johns Hopkins U. Bloomberg School of Public Health, 615 N. Wolfe St, Baltimore, MD 21205, USA.
Janice S ChenDepartment of Biochemistry and Molecular Biology, Johns Hopkins U. Bloomberg School of Public Health, 615 N. Wolfe St, Baltimore, MD 21205, USA.
Valeria C CulottaDepartment of Biochemistry and Molecular Biology, Johns Hopkins U. Bloomberg School of Public Health, 615 N. Wolfe St, Baltimore, MD 21205, USA. Electronic address: vculott1@jhu.edu.
Johns Hopkins University · US

Funding

TRAINING IN AREAS FUNDAMENTAL TO CANCER RESEARCHT32CA009110 · NCI · JOHNS HOPKINS UNIVERSITY · PI MATUNIS, MICHAEL J., WEERARATNA, ASHANI T · 1985 to 2025
$13.1M
Genetic Determinants of Oxygen ToxicityR37GM050016 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CULOTTA, VALERIA C · 2005 to 2014
$3.6M
GENETIC DETERMINANTS OF OXYGEN TOXICITYR01GM050016 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CULOTTA, VALERIA C · 1993 to 2018
$3.0M
NCI NIH HHS T32 CA009110NIGMS NIH HHS R01 GM050016NIGMS NIH HHS R37 GM50016
6 · The paper itself

Abstract

In eukaryotes, the Cu/Zn containing superoxide dismutase (SOD1) plays a critical role in oxidative stress protection as well as in signaling. We recently demonstrated a function for Saccharomyces cerevisiae Sod1p in signaling through CK1γ casein kinases and identified the essential proton ATPase Pma1p as one likely target. The connection between Sod1p and Pma1p was explored further by testing the impact of sod1Δ mutations on cells expressing mutant alleles of Pma1p that alter activity and/or post-translational regulation of this ATPase. We report here that sod1Δ mutations are lethal when combined with the T912D allele of Pma1p in the C-terminal regulatory domain. This "synthetic lethality" was reversed by intragenic suppressor mutations in Pma1p, including an A906G substitution that lies within the C-terminal regulatory domain and hyper-activates Pma1p. Surprisingly the effect of sod1Δ mutations on Pma1-T912D is not mediated through the Sod1p signaling pathway involving the CK1γ casein kinases. Rather, Sod1p sustains life of cells expressing Pma1-T912D through oxidative stress protection. The synthetic lethality of sod1Δ Pma1-T912D cells is suppressed by growing cells under low oxygen conditions or by treatments with manganese-based antioxidants. We now propose a model in which Sod1p maximizes Pma1p activity in two ways: one involving signaling through CK1γ casein kinases and an independent role for Sod1p in oxidative stress protection.

Indexed as

AcyltransferasesAmino Acid SubstitutionCasein Kinase IGenes, FungalModels, BiologicalModels, MolecularMutationOxidative StressProtein Structure, TertiaryProton-Translocating ATPasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSuperoxide DismutaseSuperoxide Dismutase-1AcyltransferasesAKR1 protein, S cerevisiaeCasein Kinase IPMA1 protein, S cerevisiaeProton-Translocating ATPasesSaccharomyces cerevisiae ProteinsSuperoxide DismutaseSuperoxide Dismutase-1YCK1 protein, S cerevisiaeCasein kinaseOxidative stressPMA1Reactive oxygen speciesSOD1Yeast

Identifiers

PMID25956063
PMCPMC4458189
OpenAlexW1563048658

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.