Evidence map›Paper›PMID 25955978›Full record

ArticleScientific reports2015

Selectivity Mechanism of the Voltage-gated Proton Channel, HV1.

Todor Dudev, Boris Musset, Deri Morgan, Vladimir V Cherny, Susan M E Smith, Karine Mazmanian, Thomas E DeCoursey, Carmay Lim

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Multicolor photoreactions of the red light-activated channelrhodopsin Chrimson.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Modulators of the Human Voltage-Gated Proton Channel HPharmaceuticals (Basel, Switzerland) · 2025
    Review
  5. Fluctuating hydrogen-bond network of the Hv1 ion channel.Computational and structural biotechnology journal · 2025
    Article
  6. Quantitative insights into the mechanism of proton conduction and selectivity for the human voltage-gated proton channel Hv1.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Transcendent Aspects of Proton Channels.Annual review of physiology · 2024
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Hydrophobic gasket mutation produces gating pore currents in closed human voltage-gated proton channels.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Unifying photocycle model for light adaptation and temporal evolution of cation conductance in channelrhodopsin-2.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. HThe Journal of eukaryotic microbiology · 2018
    Article
  20. On the control of the proton current in the voltage-gated proton channel Hv1.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Todor Dudev1] Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan [2] Faculty of Chemistry and Pharmacy, Sofia University, Sofia 1164, Bulgaria.
Boris MussetInstitute of Complex Systems (ICS-4 Zelluläre Biophysik), Forschungszentrum Jülich, Jülich, NRW, Germany.
Deri MorganDepartment of Molecular Biophysics and Physiology, Rush University, Chicago, IL 60612, USA.
Vladimir V ChernyDepartment of Molecular Biophysics and Physiology, Rush University, Chicago, IL 60612, USA.
Susan M E SmithDepartment of Biology and Physics, Kennesaw State University, Kennesaw, GA 30144, USA.
Karine Mazmanian1] Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan [2] Chemical Biology and Molecular Biophysics Program, Taiwan International Graduate Program, Academia Sinica, Nankang, Taipei 11529, Taiwan.
Thomas E DeCourseyDepartment of Molecular Biophysics and Physiology, Rush University, Chicago, IL 60612, USA.
Carmay Lim1] Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan [2] Department of Chemistry, National Tsing Hua University, Hsinchu 300, Taiwan.

Funding

Selectivity and Permeation in the Human Voltage-gated Proton Channel, hHv1R01GM102336 · NIGMS · RUSH UNIVERSITY MEDICAL CENTER · PI DECOURSEY, THOMAS E, SMITH, SUSAN M.E. · 2013 to 2016
$1.3M
Structure-Function Releationships of Voltage-Gated Proton ChannelsR01GM087507 · NIGMS · RUSH UNIVERSITY MEDICAL CENTER · PI DECOURSEY, THOMAS E · 2010 to 2013
$1.2M
NIGMS NIH HHS GM102336NIGMS NIH HHS R01 GM087507NIGMS NIH HHS R01 GM102336
6 · The paper itself

Abstract

Voltage-gated proton channels, HV1, trigger bioluminescence in dinoflagellates, enable calcification in coccolithophores, and play multifarious roles in human health. Because the proton concentration is minuscule, exquisite selectivity for protons over other ions is critical to HV1 function. The selectivity of the open HV1 channel requires an aspartate near an arginine in the selectivity filter (SF), a narrow region that dictates proton selectivity, but the mechanism of proton selectivity is unknown. Here we use a reduced quantum model to elucidate how the Asp-Arg SF selects protons but excludes other ions. Attached to a ring scaffold, the Asp and Arg side chains formed bidentate hydrogen bonds that occlude the pore. Introducing H3O(+) protonated the SF, breaking the Asp-Arg linkage and opening the conduction pathway, whereas Na(+) or Cl(-) was trapped by the SF residue of opposite charge, leaving the linkage intact, thus preventing permeation. An Asp-Lys SF behaved like the Asp-Arg one and was experimentally verified to be proton-selective, as predicted. Hence, interacting acidic and basic residues form favorable AspH(0)-H2O(0)-Arg(+) interactions with hydronium but unfavorable Asp(-)-X(-)/X(+)-Arg(+) interactions with anions/cations. This proposed mechanism may apply to other proton-selective molecules engaged in bioenergetics, homeostasis, and signaling.

Indexed as

ArginineAspartic AcidHumansIon ChannelsIonsModels, MolecularMolecular ConformationMutationProtein BindingProtonsTritiumWaterArginineAspartic AcidHVCN1 protein, humanIon ChannelsIonsProtonsTritiumtritium oxideWater

Identifiers

PMID25955978
PMCPMC4429351

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.