Evidence map›Paper›PMID 25954287›Full record

ArticleFrontiers in plant science2015

Differential responses to high- and low-dose ultraviolet-B stress in tobacco Bright Yellow-2 cells.

Shinya Takahashi, Kei H Kojo, Natsumaro Kutsuna, Masaki Endo, Seiichi Toki, Hiroko Isoda, Seiichiro Hasezawa

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Shinya TakahashiDepartment of Integrated Biosciences, Graduated School of Frontier Sciences, The University of Tokyo Kashiwa, Japan ; Alliance for Research on North Africa, University of Tsukuba Tsukuba, Japan ; Ph. D. Program in Life Science Innovation, University of Tsukuba Tsukuba, Japan.
Kei H KojoDepartment of Integrated Biosciences, Graduated School of Frontier Sciences, The University of Tokyo Kashiwa, Japan ; LPixel Inc. Bunkyo-ku, Japan.
Natsumaro KutsunaDepartment of Integrated Biosciences, Graduated School of Frontier Sciences, The University of Tokyo Kashiwa, Japan ; LPixel Inc. Bunkyo-ku, Japan.
Masaki EndoPlant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences Tsukuba, Japan.
Seiichi TokiPlant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences Tsukuba, Japan.
Hiroko IsodaAlliance for Research on North Africa, University of Tsukuba Tsukuba, Japan ; Ph. D. Program in Life Science Innovation, University of Tsukuba Tsukuba, Japan.
Seiichiro HasezawaDepartment of Integrated Biosciences, Graduated School of Frontier Sciences, The University of Tokyo Kashiwa, Japan.
The University of Tokyo · JPInstitute of Agrobiological Sciences · JPUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ultraviolet (UV)-B irradiation leads to DNA damage, cell cycle arrest, growth inhibition, and cell death. To evaluate the UV-B stress-induced changes in plant cells, we developed a model system based on tobacco Bright Yellow-2 (BY-2) cells. Both low-dose UV-B (low UV-B: 740 J m(-2)) and high-dose UV-B (high UV-B: 2960 J m(-2)) inhibited cell proliferation and induced cell death; these effects were more pronounced at high UV-B. Flow cytometry showed cell cycle arrest within 1 day after UV-B irradiation; neither low- nor high-UV-B-irradiated cells entered mitosis within 12 h. Cell cycle progression was gradually restored in low-UV-B-irradiated cells but not in high-UV-B-irradiated cells. UV-A irradiation, which activates cyclobutane pyrimidine dimer (CPD) photolyase, reduced inhibition of cell proliferation by low but not high UV-B and suppressed high-UV-B-induced cell death. UV-B induced CPD formation in a dose-dependent manner. The amounts of CPDs decreased gradually within 3 days in low-UV-B-irradiated cells, but remained elevated after 3 days in high-UV-B-irradiated cells. Low UV-B slightly increased the number of DNA single-strand breaks detected by the comet assay at 1 day after irradiation, and then decreased at 2 and 3 days after irradiation. High UV-B increased DNA fragmentation detected by the terminal deoxynucleotidyl transferase dUTP nick end labeling assay 1 and 3 days after irradiation. Caffeine, an inhibitor of ataxia telangiectasia mutated (ATM) and ataxia telangiectasia and Rad3-related (ATR) checkpoint kinases, reduced the rate of cell death in high-UV-B-irradiated cells. Our data suggest that low-UV-B-induced CPDs and/or DNA strand-breaks inhibit DNA replication and proliferation of BY-2 cells, whereas larger contents of high-UV-B-induced CPDs and/or DNA strand-breaks lead to cell death.

Indexed as

BY-2cell cyclecell deathcheckpointDNA damageultraviolet-B

Identifiers

PMID25954287
PMCPMC4404814
OpenAlexW2022150433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.