Evidence map›Paper›PMID 25954001›Full record

ArticleScience (New York, N.Y.)2015

Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans.

GTEx Consortium

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05336851 (Emergency PanorOmic Wide Association Study in Respiratory Infectious Disease), which is not on this map. Cited by 3,243 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3,243citing papers in PubMed, 7 pooled it
455.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05336851 recruitingnot on this mapstarted 2023, after this paper: background citation

Emergency PanorOmic Wide Association Study in Respiratory Infectious Disease (ePWAS-RID)

Typeobservational_patient_registrySponsorThe University of Hong KongRan2023 to 2028Enrolled2,000ConditionsViral Infections, Bacterial Infections, Fungal Infections, Mixed InfectionArmsBiomarker blood draw and saliva collection
3 · Its place in the literature

Who cites it

3,243 citing papers in PubMed, 7 syntheses or guidelines pooled it, 5,617 citations in OpenAlex.

  1. Pooled it
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  14. Biomedicines · 2026
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  17. UnlockingNAR genomics and bioinformatics · 2026
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3,183 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

1 author at 2 institutions in 1 country.

GTEx Consortium
Genetic Improvement and Adaptation of Mediterranean and Tropical Plants · FRAgropolis International · FR

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
Integrative Network Biology Approaches to Identify, Characterize and Validate Molecular Subtypes in Alzheimer's DiseaseU01AG046170 · NIA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI WANG, MINGHUI, ZHANG, BIN · 2013 to 2022
$26.0M
Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI Matthew J Brady · 2013 to 2026
$20.9M
Omics-Based Predictive Modeling of Age-Dependent Outcome to Influenza InfectionU01AI111598 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GHEDIN, ELODIE · 2013 to 2017
$13.3M
Developing an Oncology Workforce for the 21st Century - Renewal 01K12CA139160 · NCI · UNIVERSITY OF CHICAGO · PI OLOPADE, OLUFUNMILAYO F., SMITH, SONALI · 2010 to 2024
$10.6M
LIMBIC &MEDULLARY MECH. IN COCAINE-RELATED SUDDEN DEATHR01DA006227 · NIDA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MASH, DEBORAH C. · 1990 to 2012
$3.7M
Epigenomic variation atlas across human tissues and individuals in GTExU01HG007610 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KELLIS, MANOLIS · 2014 to 2016
$3.0M
Lung Adenocarcinoma Invasion GenomicsR01CA163772 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MASSION, PIERRE P., POWELL, CHARLES A. · 2013 to 2017
$2.9M
Harnessing GTEx to Create Transcriptome Knowledge and Inform Disease BiologyR01MH101820 · NIMH · UNIVERSITY OF CHICAGO · PI COX, NANCY J, NICOLAE, DAN LIVIU · 2013 to 2015
$2.3M
Annotation and interpretation of loss-of-function polymorphisms in human genomesR01GM104371 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI MACARTHUR, DANIEL G · 2013 to 2016
$1.3M
Systems approaches to link tissue-specific expression to diseaseR01MH101819 · NIMH · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI NOBEL, ANDREW B, WRIGHT, FRED A. · 2013 to 2015
$1.3M
Statistical analysis of gene expression quantitative trait loci (eQTL)R01MH090951 · NIMH · UNIVERSITY OF CHICAGO · PI PRITCHARD, JONATHAN K · 2010 to 2012
$873k
CCR NIH HHS HHSN261200800001CNCI NIH HHS HHSN261200800001ENCI NIH HHS K12 CA139160NCI NIH HHS P30 CA016056NCI NIH HHS R01 CA163772NCI NIH HHS R01CA163772NHGRI NIH HHS U01 HG007610NHLBI NIH HHS HHSN268201000029CNIAID NIH HHS U01 AI111598NIAID NIH HHS U01AI111598-01NIA NIH HHS R01AG046170NIA NIH HHS U01 AG046170NIDA NIH HHS R01 DA006227NIDA NIH HHS R01 DA006227-17NIDDK NIH HHS P30 DK020595NIGMS NIH HHS R01 GM104371NIMH NIH HHS R01 MH090936NIMH NIH HHS R01 MH090937NIMH NIH HHS R01 MH090941NIMH NIH HHS R01 MH090948NIMH NIH HHS R01 MH090951NIMH NIH HHS R01 MH101819NIMH NIH HHS R01 MH101820Wellcome TrustWellcome Trust 098381
6 · The paper itself

Abstract

Understanding the functional consequences of genetic variation, and how it affects complex human disease and quantitative traits, remains a critical challenge for biomedicine. We present an analysis of RNA sequencing data from 1641 samples across 43 tissues from 175 individuals, generated as part of the pilot phase of the Genotype-Tissue Expression (GTEx) project. We describe the landscape of gene expression across tissues, catalog thousands of tissue-specific and shared regulatory expression quantitative trait loci (eQTL) variants, describe complex network relationships, and identify signals from genome-wide association studies explained by eQTLs. These findings provide a systematic understanding of the cellular and biological consequences of human genetic variation and of the heterogeneity of such effects among a diverse set of human tissues.

Indexed as

Gene Expression RegulationGenetic VariationQuantitative Trait LociTranscriptomeAllelesBlood PressureDiseaseGene Regulatory NetworksGenome, HumanGenome-Wide Association StudyGenotypeGTPase-Activating ProteinsHumansMultigene FamilyOrgan SpecificityPilot ProjectsARHGAP42 protein, humanGTPase-Activating ProteinsRNA, Untranslated

Identifiers

PMID25954001
PMCPMC4547484
OpenAlexW1533942137

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.